Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC008850.1-201ENST00000427546 362 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC007919.1-201ENST00000429380 217 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AL008629.1-201ENST00000438615 184 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 TPT1P14-201ENST00000448018 505 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RPL12P25-201ENST00000455592 494 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 MTND2P14-201ENST00000482139 351 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RPS29P21-201ENST00000496272 170 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 MIR892C-201ENST00000516410 77 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 Y_RNA.717-201ENST00000517106 92 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AP004247.1-201ENST00000531556 1289 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC118273.2-201ENST00000532092 465 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 LRRC34P1-201ENST00000542742 915 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC090888.2-201ENST00000559765 1144 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC009094.1-201ENST00000564443 426 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC008751.2-201ENST00000597885 980 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC063944.3-201ENST00000609969 533 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AC019226.1-201ENST00000625666 515 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 RNU6-884P-201ENST00000363889 107 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 SNORA23-201ENST00000365128 182 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 RNU6-516P-201ENST00000411381 104 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 RPL31P63-201ENST00000422565 375 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 ZNF863P-201ENST00000426746 417 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 LARP1BP3-201ENST00000437229 869 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC107032.1-201ENST00000485945 480 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 SNORA31.6-201ENST00000516241 130 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 MIR4529-201ENST00000578110 78 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC008121.1-201ENST00000603244 268 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AP000403.1-201ENST00000603349 851 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AP000811.1-201ENST00000603803 651 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 Z99289.3-201ENST00000605586 594 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC004908.2-201ENST00000609090 574 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AL391813.2-201ENST00000609113 322 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 FTX_3.1-201ENST00000610451 147 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC005296.1-201ENST00000616145 209 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AP000676.3-201ENST00000623299 569 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 PCMTD1P7-201ENST00000634506 357 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 AC092125.1-201ENST00000562568 1995 ntBASIC1.64□□□□□ -2.15
SMARCD3Q6STE5 ZNF702P-202ENST00000434269 1966 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 Y_RNA.18-201ENST00000362461 102 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 Y_RNA.97-201ENST00000363094 102 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 U8.14-201ENST00000390843 143 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 AL079342.1-201ENST00000401460 267 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 AL359704.1-201ENST00000411586 781 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 AC078974.1-201ENST00000411597 223 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 UBE2FP1-201ENST00000416536 447 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 AC003989.2-201ENST00000440224 169 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 MTND5P2-201ENST00000442927 1142 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 MTATP6P30-201ENST00000443540 664 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 GDI2P2-201ENST00000445131 608 ntBASIC1.63□□□□□ -2.15
SMARCD3Q6STE5 FABP5P13-201ENST00000452144 328 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms