Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 GABRG2-229ENST00000641017 3628 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 CDC27P3-201ENST00000635418 1910 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-37P-201ENST00000362692 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU1-105P-201ENST00000363470 161 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 Y_RNA.166-201ENST00000363730 102 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-11P-201ENST00000364234 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-7-201ENST00000364784 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-8-201ENST00000365467 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC068538.1-201ENST00000376856 336 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-25P-201ENST00000383873 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-1-201ENST00000383898 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-48P-201ENST00000384161 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-36P-201ENST00000384172 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-4P-201ENST00000384205 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-5P-201ENST00000384238 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-3P-201ENST00000384314 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-16P-201ENST00000384385 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-15P-201ENST00000384534 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-2-201ENST00000384627 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-29P-201ENST00000384637 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-9-201ENST00000384776 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-33P-201ENST00000384793 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 MIR141-201ENST00000384975 95 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNA5SP424-201ENST00000390988 115 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC006989.1-201ENST00000427212 131 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AL117339.2-201ENST00000430475 180 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AL159987.2-201ENST00000432754 307 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 H2AFZP6-201ENST00000444403 394 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC009220.1-201ENST00000451614 275 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 NIPA2P5-201ENST00000452282 464 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC104472.2-201ENST00000469035 601 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-256P-201ENST00000516747 97 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 MIR4742-201ENST00000581069 85 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 OR1M4P-201ENST00000589199 287 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC005498.1-201ENST00000592125 465 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC008121.1-201ENST00000603244 268 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AL590392.1-201ENST00000604960 446 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC021646.1-201ENST00000605469 484 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RNU6-6P-201ENST00000606623 107 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AL022345.1-201ENST00000607292 135 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 MTND4P12-201ENST00000498999 1377 ntBASIC3.47□□□□□ -1.85
RNF220Q5VTB9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RNF220Q5VTB9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
RNF220Q5VTB9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RNF220Q5VTB9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RNU6-799P-201ENST00000363567 107 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RNA5SP515-201ENST00000364570 118 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RNU6-128P-201ENST00000383976 107 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RNU6-214P-201ENST00000384130 107 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RAB9AP3-201ENST00000412737 573 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC009969.1-201ENST00000438726 172 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 USP9YP8-201ENST00000441913 500 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AL359672.1-201ENST00000442302 409 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RAB9AP1-201ENST00000449393 573 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC006026.2-201ENST00000457376 180 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 RNU7-30P-201ENST00000516835 62 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AP004607.1-201ENST00000524456 203 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AP000889.2-201ENST00000532684 490 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC006199.1-201ENST00000548728 219 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AL121821.2-201ENST00000556081 394 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC026464.5-201ENST00000562497 722 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AP000787.2-201ENST00000604432 568 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 MIR378J-201ENST00000611988 109 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms