Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 RNU6-787P-201ENST00000384032 107 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 RPS29P33-201ENST00000456717 146 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 RNU6-857P-201ENST00000515893 110 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 RNU6-572P-201ENST00000516724 80 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 AC027369.5-201ENST00000533838 755 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 IPO5P1-202ENST00000600039 287 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 AL022345.2-201ENST00000606307 135 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 RMST_8.1-201ENST00000610287 165 ntBASIC5.64□□□□□ -1.51
VARS2Q5ST30 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VARS2Q5ST30 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VARS2Q5ST30 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VARS2Q5ST30 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC092681.1-201ENST00000297369 291 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 RNU6-1285P-201ENST00000363480 105 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 RNU6-1276P-201ENST00000365372 104 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 RPS26P42-201ENST00000413485 326 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 GPM6BP3-201ENST00000442797 145 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 BX276092.4-201ENST00000452056 248 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 snoU13.6-201ENST00000458785 104 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC092490.3-201ENST00000545370 572 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC011447.4-201ENST00000587562 111 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 SNRPGP20-201ENST00000604477 205 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 AL139124.1-201ENST00000609123 421 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC244107.2-201ENST00000611773 76 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 uc_338.7-201ENST00000621834 124 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 AC004076.2-201ENST00000620532 3323 ntBASIC5.63□□□□□ -1.51
VARS2Q5ST30 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VARS2Q5ST30 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
VARS2Q5ST30 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VARS2Q5ST30 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VARS2Q5ST30 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VARS2Q5ST30 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 U3.3-201ENST00000362986 216 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 RNU6-1264P-201ENST00000383891 107 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 MIR600-201ENST00000385007 98 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 MIR1278-201ENST00000408753 81 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 BX276092.6-201ENST00000430476 250 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 AC009237.8-201ENST00000445492 379 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 AP000705.1-201ENST00000454567 350 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 BX276092.8-201ENST00000455722 250 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 RPS4XP2-201ENST00000458402 793 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.62□□□□□ -1.51
VARS2Q5ST30 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.62□□□□□ -1.51
VARS2Q5ST30 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARS2Q5ST30 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VARS2Q5ST30 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VARS2Q5ST30 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VARS2Q5ST30 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 SNORA63.5-201ENST00000363548 123 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 SNORA36A-201ENST00000384221 132 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms