Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 LARP1BP2-201ENST00000486594 519 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 RNU6-113P-201ENST00000516653 101 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC103833.1-201ENST00000517442 172 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC107953.1-201ENST00000522216 297 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC012435.1-202ENST00000568772 240 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC007151.1-201ENST00000572774 483 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC105245.1-201ENST00000581934 244 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC016727.2-201ENST00000603988 621 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 RNU4-38P-201ENST00000364472 129 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 RNU6-619P-201ENST00000365146 108 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 RNU6-217P-201ENST00000384164 104 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 MIR30A-201ENST00000385092 71 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 ZNF863P-201ENST00000426746 417 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 GDI2P2-201ENST00000445131 608 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AL096803.2-201ENST00000450032 677 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AC112492.4-201ENST00000456549 352 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 HMGB1P35-201ENST00000503360 598 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 RRN3P3-201ENST00000549207 578 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AP000403.1-201ENST00000603349 851 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AC123912.5-201ENST00000605470 343 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 AC103810.9-201ENST00000606688 112 ntBASIC1.24□□□□□ -2.21
RFX7Q2KHR2 RNA5SP240-201ENST00000365355 128 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 RNU6-741P-201ENST00000383889 107 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 SNORD116-23-201ENST00000384645 92 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 RNU6-796P-201ENST00000391086 107 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 OR6C66P-201ENST00000414917 930 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AC019178.2-201ENST00000423595 505 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AC092648.1-201ENST00000425870 423 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 MED14P1-201ENST00000430517 648 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 MRPS33P3-201ENST00000513456 322 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 RNU6-362P-201ENST00000516736 90 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AL731537.2-201ENST00000561565 951 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AC016925.2-201ENST00000605108 242 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 AC004067.1-201ENST00000608733 700 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 MIR6130-201ENST00000619419 109 ntBASIC1.23□□□□□ -2.21
RFX7Q2KHR2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
RFX7Q2KHR2 RNA5SP465-201ENST00000391195 109 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 HMGN1P14-201ENST00000412459 517 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AC008850.1-201ENST00000427546 362 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AC007919.1-201ENST00000429380 217 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AC098591.2-201ENST00000510152 315 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 RNA5SP135-201ENST00000517019 125 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AC090502.2-201ENST00000549267 280 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AL031274.2-201ENST00000599419 203 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 AP000776.1-201ENST00000530032 1663 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
RFX7Q2KHR2 DBF4P1-201ENST00000412976 1892 ntBASIC1.22□□□□□ -2.21
RFX7Q2KHR2 RNU6-884P-201ENST00000363889 107 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 RNU6-140P-201ENST00000384566 108 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 MTCO2P31-201ENST00000402702 684 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 RNU2-28P-201ENST00000410457 189 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 SUMO2P2-201ENST00000456482 255 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC013828.1-201ENST00000481845 158 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC118282.2-201ENST00000508739 374 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 RNU6-885P-201ENST00000516607 104 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 SNORA31.22-201ENST00000517204 135 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC092140.2-201ENST00000618027 521 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC092192.1-201ENST00000633154 1018 ntBASIC1.21□□□□□ -2.21
RFX7Q2KHR2 AC010889.1-201ENST00000566193 2666 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 AC068700.1-201ENST00000565862 3754 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RFX7Q2KHR2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms