Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RPE65Q16518 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.16□□□□□ -1.9
RPE65Q16518 RPS15AP6-201ENST00000420703 385 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 MTATP6P23-201ENST00000440153 476 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 AC006539.3-201ENST00000454258 129 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.16□□□□□ -1.9
RPE65Q16518 AC098799.2-201ENST00000509466 868 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.16□□□□□ -1.9
RPE65Q16518 RNU6-1038P-201ENST00000516516 104 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.16□□□□□ -1.9
RPE65Q16518 AC093331.1-201ENST00000521474 169 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.16□□□□□ -1.9
RPE65Q16518 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
RPE65Q16518 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.16□□□□□ -1.9
RPE65Q16518 AMZ2P1-203ENST00000565833 850 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 MIR4474-201ENST00000579189 78 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.16□□□□□ -1.9
RPE65Q16518 DUXAP9-208ENST00000622815 614 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 AP003400.5-201ENST00000624827 617 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RPE65Q16518 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPE65Q16518 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.15□□□□□ -1.9
RPE65Q16518 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RPE65Q16518 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPE65Q16518 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPE65Q16518 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RPE65Q16518 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.91
RPE65Q16518 Y_RNA.88-201ENST00000363029 99 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RNU6-82P-201ENST00000363970 107 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 Y_RNA.390-201ENST00000383932 102 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RNU6-1179P-201ENST00000384667 107 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 MIR578-201ENST00000384828 96 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 MIR491-201ENST00000384877 84 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPE65Q16518 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.15□□□□□ -1.91
RPE65Q16518 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.15□□□□□ -1.91
RPE65Q16518 AL669831.1-202ENST00000428504 417 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 GTF2IP13-201ENST00000438487 386 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.15□□□□□ -1.91
RPE65Q16518 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.15□□□□□ -1.91
RPE65Q16518 HMGN2P26-201ENST00000463169 339 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 HMGB1P30-201ENST00000492455 606 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 Y_RNA.654-201ENST00000497848 106 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 CCDC34P1-201ENST00000507441 517 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.15□□□□□ -1.91
RPE65Q16518 AC008716.1-201ENST00000511084 513 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 RN7SKP57-201ENST00000517248 293 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.15□□□□□ -1.91
RPE65Q16518 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.15□□□□□ -1.91
RPE65Q16518 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AL355598.1-201ENST00000604169 202 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AC092807.2-201ENST00000609367 243 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AC093913.1-201ENST00000614178 329 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 AP003122.6-201ENST00000623831 495 ntBASIC3.15□□□□□ -1.91
RPE65Q16518 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPE65Q16518 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RPE65Q16518 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.15□□□□□ -1.91
RPE65Q16518 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPE65Q16518 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
RPE65Q16518 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.14□□□□□ -1.91
RPE65Q16518 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
RPE65Q16518 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 RNU6-371P-201ENST00000364283 108 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 Y_RNA.378-201ENST00000365652 113 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 MIR591-201ENST00000385290 95 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 RNA5SP219-201ENST00000390940 113 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 SNORA16.2-201ENST00000390991 127 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 RPS4XP7-201ENST00000406274 780 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AL353678.1-201ENST00000422735 741 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AL513185.2-201ENST00000425543 193 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 PRPS1P1-201ENST00000445305 876 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.14□□□□□ -1.91
RPE65Q16518 RNU6-1208P-201ENST00000459588 107 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC007547.1-201ENST00000462177 490 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC109925.1-201ENST00000478069 331 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC079140.5-201ENST00000507882 310 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 HIGD1AP13-201ENST00000509878 289 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC112206.3-201ENST00000514578 389 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 RNU2-69P-201ENST00000516061 100 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.14□□□□□ -1.91
RPE65Q16518 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.14□□□□□ -1.91
RPE65Q16518 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.14□□□□□ -1.91
RPE65Q16518 MIR5004-201ENST00000579078 107 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 MIR3941-201ENST00000582572 103 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC018638.8-201ENST00000588755 281 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC012119.1-201ENST00000603184 222 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC092747.3-201ENST00000603769 301 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 AC099778.2-201ENST00000610904 211 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms