Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 TPTE2P4-201ENST00000258589 1605 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 U3.13-201ENST00000364804 214 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 RNU6-1083P-201ENST00000384022 107 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 Y_RNA.548-201ENST00000384656 105 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 MIR329-2-201ENST00000385029 84 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 SNORA40C-201ENST00000391285 128 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 MTCO2P31-201ENST00000402702 684 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 RNU4-78P-201ENST00000410940 126 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 AL714022.1-201ENST00000439897 151 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.68□□□□□ -2.3
CACNA1EQ15878 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.68□□□□□ -2.3
CACNA1EQ15878 AC116337.2-201ENST00000477662 156 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 SNORA70.16-201ENST00000516390 95 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.68□□□□□ -2.3
CACNA1EQ15878 HMGB1P14-201ENST00000557424 591 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 AC040174.2-201ENST00000602701 465 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 MTND4LP5-201ENST00000605152 292 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.68□□□□□ -2.3
CACNA1EQ15878 ZNF702P-202ENST00000434269 1966 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.68□□□□□ -2.3
CACNA1EQ15878 AL356473.1-201ENST00000406203 1408 ntBASIC0.68□□□□□ -2.3
CACNA1EQ15878 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.68□□□□□ -2.3
CACNA1EQ15878 DBF4P1-201ENST00000412976 1892 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1EQ15878 CBX3P1-201ENST00000325243 554 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNU6-942P-201ENST00000363002 107 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 MIR525-201ENST00000384978 85 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNU6-1328P-201ENST00000410938 106 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL121578.1-201ENST00000428051 892 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 UBE2V2P3-201ENST00000433562 437 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 MTCYBP3-201ENST00000445588 1137 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 SUMO2P2-201ENST00000456482 255 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNU7-23P-201ENST00000459465 62 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC104689.1-201ENST00000473356 768 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 VPS26AP1-201ENST00000483197 979 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 CBX3P3-201ENST00000508108 532 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNU6-1004P-201ENST00000516584 111 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC090888.1-201ENST00000561335 1141 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 HMGB1P51-201ENST00000605166 638 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC090132.2-201ENST00000615881 347 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1EQ15878 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNA5SP331-201ENST00000364986 107 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 RNU6-619P-201ENST00000365146 108 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL158823.1-201ENST00000418441 478 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC093106.2-201ENST00000428212 385 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 TAAR7P-201ENST00000436141 242 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 RPL23AP6-201ENST00000446637 472 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL353691.1-201ENST00000451332 387 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC103851.1-201ENST00000506833 274 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 TPT1P8-201ENST00000510120 555 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 LARP7P2-201ENST00000575306 125 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1EQ15878 AL020997.3-201ENST00000602843 359 ntBASIC0.67□□□□□ -2.3
CACNA1EQ15878 AC016716.1-201ENST00000265882 708 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC083799.1-201ENST00000366451 910 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 RNU6-1226P-201ENST00000384317 107 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 RNU6-921P-201ENST00000384361 107 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 MTND1P33-201ENST00000446251 917 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC008379.1-201ENST00000463655 464 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 MIR4504-201ENST00000577413 92 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 AL158032.1-201ENST00000605401 106 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC011939.3-201ENST00000613686 466 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC002550.2-201ENST00000621246 394 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC083865.1-201ENST00000636634 831 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1EQ15878 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1EQ15878 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 RNA5SP276-201ENST00000362580 94 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 RNU6-650P-201ENST00000365658 111 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 RNU2-43P-201ENST00000410306 190 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 Z82210.1-201ENST00000440037 231 ntBASIC0.66□□□□□ -2.3
CACNA1EQ15878 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.66□□□□□ -2.3
CACNA1EQ15878 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms