Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
FOXF1Q12946 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.47□□□□□ -2.17
FOXF1Q12946 AC006026.1-201ENST00000444025 1803 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.46□□□□□ -2.18
FOXF1Q12946 RNU6-1284P-201ENST00000363701 100 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 MIR620-201ENST00000385232 95 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 RPS20P15-201ENST00000412792 311 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 RPL21P24-201ENST00000413752 448 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 CYCSP48-201ENST00000417124 323 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXF1Q12946 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXF1Q12946 RPL31P63-201ENST00000422565 375 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 SKA2P1-201ENST00000425592 390 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXF1Q12946 IFNA20P-201ENST00000436840 528 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXF1Q12946 ELOCP30-201ENST00000447108 299 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXF1Q12946 FABP5P15-201ENST00000453566 214 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 HMGN2P23-201ENST00000456759 269 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.46□□□□□ -2.18
FOXF1Q12946 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXF1Q12946 BZW1P2-201ENST00000473537 826 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXF1Q12946 LTV1P1-201ENST00000510683 1237 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXF1Q12946 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.46□□□□□ -2.18
FOXF1Q12946 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.46□□□□□ -2.18
FOXF1Q12946 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXF1Q12946 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXF1Q12946 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.46□□□□□ -2.18
FOXF1Q12946 AC009977.1-201ENST00000586015 570 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.46□□□□□ -2.18
FOXF1Q12946 AL161798.1-201ENST00000604630 131 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC080013.3-201ENST00000606839 578 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC069294.1-201ENST00000608397 350 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AL121652.1-201ENST00000608851 448 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC072039.2-201ENST00000608883 439 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC108479.2-201ENST00000617314 601 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC009269.6-201ENST00000621778 588 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC091953.2-201ENST00000623979 160 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC079416.3-201ENST00000624479 549 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 AC099654.9-201ENST00000637055 678 ntBASIC1.46□□□□□ -2.18
FOXF1Q12946 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
FOXF1Q12946 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
FOXF1Q12946 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
FOXF1Q12946 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
FOXF1Q12946 RNY4P24-201ENST00000362735 96 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 RNU6-1167P-201ENST00000363227 94 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 SNORA16B-201ENST00000364674 135 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 RNA5SP363-201ENST00000365072 115 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 RNU6-636P-201ENST00000384598 107 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXF1Q12946 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.45□□□□□ -2.18
FOXF1Q12946 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXF1Q12946 AC003685.2-201ENST00000422795 395 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXF1Q12946 EIF4EP4-201ENST00000424916 578 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC092648.1-201ENST00000425870 423 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXF1Q12946 AC124916.1-201ENST00000444020 547 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXF1Q12946 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXF1Q12946 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXF1Q12946 snoU13.23-201ENST00000458863 104 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC010631.1-201ENST00000474150 156 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXF1Q12946 AC108210.2-201ENST00000503681 201 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC093281.2-201ENST00000510153 597 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
FOXF1Q12946 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXF1Q12946 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXF1Q12946 RNU6-703P-201ENST00000516946 107 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.45□□□□□ -2.18
FOXF1Q12946 RPS3AP4-201ENST00000555161 764 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AL133241.1-201ENST00000556832 487 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC021171.1-201ENST00000603137 706 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC008121.1-201ENST00000603244 268 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 BCRP9-201ENST00000605312 388 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC004805.2-201ENST00000605382 482 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 RNU4-5P-201ENST00000607255 135 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC007038.2-201ENST00000608095 740 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 U4atac.1-201ENST00000618345 95 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 AC025048.6-202ENST00000627667 438 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 MIR3199-2-201ENST00000636243 86 ntBASIC1.45□□□□□ -2.18
FOXF1Q12946 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
FOXF1Q12946 SNORA4.1-201ENST00000364263 144 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
FOXF1Q12946 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
FOXF1Q12946 U6atac.2-201ENST00000408644 118 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 PIGPP2-201ENST00000411569 458 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 PGBD4P6-201ENST00000421501 610 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXF1Q12946 MTND3P1-201ENST00000441336 220 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXF1Q12946 HMGN2P10-201ENST00000448085 265 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms