Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC023194.1-201ENST00000493084 308 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RAB40BQ12829 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC108078.2-201ENST00000510750 236 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU2-46P-201ENST00000517038 113 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC109329.2-201ENST00000519658 482 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 PRELID2P1-201ENST00000552837 301 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC023824.2-201ENST00000566185 400 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AF131215.7-201ENST00000602443 707 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL021997.1-201ENST00000605757 193 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC091304.9-201ENST00000612091 226 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC010678.1-201ENST00000614118 713 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC008250.2-201ENST00000615261 205 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC024940.5-201ENST00000622889 474 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC091931.1-201ENST00000623488 728 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC120349.3-201ENST00000624377 529 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC025048.6-202ENST00000627667 438 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.16□□□□□ -2.06
RAB40BQ12829 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAB40BQ12829 AL359854.1-201ENST00000614203 1594 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAB40BQ12829 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAB40BQ12829 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 SNORA80A-201ENST00000363922 136 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 RNU1-51P-201ENST00000365345 176 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAB40BQ12829 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC127391.1-201ENST00000411737 98 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC114491.1-201ENST00000416095 246 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 USP9YP27-201ENST00000418455 438 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.16□□□□□ -2.06
RAB40BQ12829 MED13P1-201ENST00000428342 171 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.16□□□□□ -2.06
RAB40BQ12829 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.16□□□□□ -2.06
RAB40BQ12829 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.16□□□□□ -2.06
RAB40BQ12829 PGBD4P3-201ENST00000440731 581 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AL441985.1-201ENST00000457727 251 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 RPL23AP45-201ENST00000476406 468 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 RAP1BP2-201ENST00000478270 544 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 FAM92A1P2-202ENST00000504766 877 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC116655.1-201ENST00000508324 901 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC117522.1-201ENST00000509821 380 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 ACA59.2-201ENST00000517061 156 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 SCARNA3-201ENST00000517097 143 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.16□□□□□ -2.06
RAB40BQ12829 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AC022616.3-201ENST00000523940 148 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 DUXAP5-201ENST00000529668 529 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RAB40BQ12829 ADI1P3-201ENST00000549509 470 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC078814.3-201ENST00000553036 491 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.16□□□□□ -2.06
RAB40BQ12829 AC007336.1-201ENST00000576365 3828 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 MIR4658-201ENST00000584344 65 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC005771.1-201ENST00000585581 349 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 NRBF2P1-201ENST00000587407 859 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AL049779.4-201ENST00000604500 156 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AC012409.4-201ENST00000612923 249 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 AL133173.2-201ENST00000614270 90 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 HMGB1P24-202ENST00000615653 685 ntBASIC2.16□□□□□ -2.06
RAB40BQ12829 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.16□□□□□ -2.06
RAB40BQ12829 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.16□□□□□ -2.06
RAB40BQ12829 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RAB40BQ12829 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AP000568.1-201ENST00000282964 442 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 RNU6-859P-201ENST00000362728 107 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 RNU4-21P-201ENST00000362802 126 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 RNY4P34-201ENST00000364779 95 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RAB40BQ12829 RNU6-166P-201ENST00000384371 107 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 RNU6-748P-201ENST00000384648 107 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RAB40BQ12829 RPS3AP3-201ENST00000411933 242 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 HMGN1P14-201ENST00000412459 517 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC107081.1-201ENST00000414975 361 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 RPL30P4-201ENST00000429309 333 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.15□□□□□ -2.07
RAB40BQ12829 SUMO1P4-201ENST00000429430 302 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 MYL8P-204ENST00000431574 518 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC104850.1-201ENST00000435940 476 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AC004383.1-201ENST00000438135 289 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC105272.1-201ENST00000438604 198 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms