Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.23□□□□□ -2.37
TFF3Q07654 AC067863.3-201ENST00000624172 122 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 Z99571.1-201ENST00000636677 394 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
TFF3Q07654 RNU6-1155P-201ENST00000363554 107 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 Y_RNA.280-201ENST00000364765 112 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
TFF3Q07654 SNORA40.19-201ENST00000390846 128 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 MTCO3P12-201ENST00000416718 547 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 MICF-203ENST00000432679 129 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 AC112492.4-201ENST00000456549 352 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.22□□□□□ -2.37
TFF3Q07654 HMGN1P10-201ENST00000474557 553 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.22□□□□□ -2.37
TFF3Q07654 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.22□□□□□ -2.37
TFF3Q07654 AC090115.3-201ENST00000553218 849 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.22□□□□□ -2.37
TFF3Q07654 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.22□□□□□ -2.37
TFF3Q07654 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.22□□□□□ -2.37
TFF3Q07654 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 AL139344.1-201ENST00000605228 195 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 AC110792.4-201ENST00000609843 298 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 AL021879.1-201ENST00000611756 288 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 AP003399.1-201ENST00000637534 361 ntBASIC0.22□□□□□ -2.37
TFF3Q07654 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.21□□□□□ -2.38
TFF3Q07654 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.21□□□□□ -2.38
TFF3Q07654 RNU1-96P-201ENST00000364163 162 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 Y_RNA.412-201ENST00000384001 104 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.21□□□□□ -2.38
TFF3Q07654 AL356421.1-201ENST00000403255 413 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 ZNF863P-201ENST00000426746 417 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.21□□□□□ -2.38
TFF3Q07654 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.21□□□□□ -2.38
TFF3Q07654 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.21□□□□□ -2.38
TFF3Q07654 CYP2C59P-201ENST00000457790 269 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 PNPLA4P1-201ENST00000458328 305 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 HMGB1P35-201ENST00000503360 598 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.21□□□□□ -2.38
TFF3Q07654 RNU4-77P-201ENST00000516692 156 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AC034114.1-201ENST00000520293 285 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AC036111.3-201ENST00000526389 112 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 AC004923.2-201ENST00000529649 369 ntBASIC0.21□□□□□ -2.38
TFF3Q07654 GDI2P1-201ENST00000429312 1336 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 SNORD124-201ENST00000459577 104 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.2□□□□□ -2.38
TFF3Q07654 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.2□□□□□ -2.38
TFF3Q07654 RNU5F-8P-201ENST00000515941 111 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 RNA5SP395-201ENST00000516567 118 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.2□□□□□ -2.38
TFF3Q07654 AC107954.1-201ENST00000565906 727 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 AC012414.6-201ENST00000568241 401 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 AC012435.1-202ENST00000568772 240 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
TFF3Q07654 AC008751.2-201ENST00000597885 980 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 AC019131.2-201ENST00000609071 870 ntBASIC0.2□□□□□ -2.38
TFF3Q07654 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.2□□□□□ -2.38
TFF3Q07654 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TFF3Q07654 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.19□□□□□ -2.38
TFF3Q07654 RNA5SP327-201ENST00000362494 101 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 MIR518A2-201ENST00000384966 87 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 MIR493-201ENST00000385254 89 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 MIR320B1-201ENST00000390209 79 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.19□□□□□ -2.38
TFF3Q07654 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.19□□□□□ -2.38
TFF3Q07654 GTF2IP20-201ENST00000431663 360 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 AC244505.3-201ENST00000454598 187 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 AC114982.1-201ENST00000469402 321 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 AC091435.1-201ENST00000505442 584 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 AC107953.1-201ENST00000522216 297 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.19□□□□□ -2.38
TFF3Q07654 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.19□□□□□ -2.38
TFF3Q07654 MTCYBP22-201ENST00000603788 447 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 AL138726.1-201ENST00000614873 333 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TFF3Q07654 AC027309.3-201ENST00000623419 351 ntBASIC0.19□□□□□ -2.38
TFF3Q07654 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.18□□□□□ -2.38
TFF3Q07654 RNU6-26P-201ENST00000383985 107 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 RNU6-968P-201ENST00000384076 107 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 NDUFS5P1-201ENST00000405668 289 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
TFF3Q07654 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.18□□□□□ -2.38
TFF3Q07654 AC098592.2-201ENST00000413158 265 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.18□□□□□ -2.38
TFF3Q07654 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.18□□□□□ -2.38
TFF3Q07654 AL589880.1-201ENST00000448271 287 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 RPL26P9-201ENST00000457466 433 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 RAP1BP2-201ENST00000478270 544 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.18□□□□□ -2.38
TFF3Q07654 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.18□□□□□ -2.38
TFF3Q07654 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.18□□□□□ -2.38
TFF3Q07654 AC108157.1-201ENST00000510511 539 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 AC087481.2-201ENST00000565492 330 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.18□□□□□ -2.38
TFF3Q07654 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 AL669831.4-202ENST00000590817 238 ntBASIC0.18□□□□□ -2.38
TFF3Q07654 AL355877.2-201ENST00000603670 358 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms