Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC009314.1-201ENST00000603871 304 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL022099.1-201ENST00000604551 712 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL161756.2-201ENST00000604597 246 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL603758.1-201ENST00000618654 241 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CKAP4Q07065 UCA1.1-201ENST00000620952 75 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 OR5AK4P-201ENST00000635912 903 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL365361.1-201ENST00000566942 3481 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 SDAD1P2-201ENST00000441308 2028 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 TPTE2P4-201ENST00000258589 1605 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.28□□□□□ -2.04
CKAP4Q07065 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CKAP4Q07065 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CKAP4Q07065 RNU1-105P-201ENST00000363470 161 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RNU6-511P-201ENST00000363496 107 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RNY3P13-201ENST00000365542 102 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CKAP4Q07065 RNU6-1197P-201ENST00000391183 107 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 GSTA9P-201ENST00000406231 611 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RNU2-62P-201ENST00000410868 191 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC127391.1-201ENST00000411737 98 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC007064.1-201ENST00000412238 351 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.28□□□□□ -2.04
CKAP4Q07065 RPL7L1P10-201ENST00000427790 463 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 C8orf59P1-201ENST00000429930 303 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC092573.2-201ENST00000434546 243 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 ARPC3P1-201ENST00000437218 533 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC107083.1-201ENST00000439643 279 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AL121871.1-201ENST00000443413 436 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 AC132479.1-201ENST00000449160 144 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 C1DP4-201ENST00000455429 424 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 SRRM1P2-201ENST00000464531 1192 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RPL9P6-201ENST00000492764 598 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 HMGB1P29-201ENST00000505659 499 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 AC113155.1-201ENST00000511141 769 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 AC026801.2-201ENST00000515352 425 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC022616.3-201ENST00000523940 148 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC016957.1-201ENST00000534895 309 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 AC087883.1-201ENST00000551882 391 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 HMGB1P6-201ENST00000569046 646 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 MIR4429-201ENST00000580105 73 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP4Q07065 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 NRBF2P5-201ENST00000603087 788 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 TUG1_2.1-201ENST00000614234 87 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AL133173.2-201ENST00000614270 90 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 AC138649.3-201ENST00000622154 254 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 MIR4275-201ENST00000636486 87 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKAP4Q07065 DDX10P1-201ENST00000448545 1933 ntBASIC2.28□□□□□ -2.04
CKAP4Q07065 CR848007.1-201ENST00000442354 1699 ntBASIC2.28□□□□□ -2.05
CKAP4Q07065 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.28□□□□□ -2.05
CKAP4Q07065 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CKAP4Q07065 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC008568.2-201ENST00000623862 2313 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNA5SP160-201ENST00000364866 120 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNU6-169P-201ENST00000365336 107 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNU6-282P-201ENST00000365357 103 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 SNORA20.2-201ENST00000383922 131 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNU6-76P-201ENST00000384060 104 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNU6-648P-201ENST00000410190 107 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RN7SKP27-201ENST00000410684 333 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RPS15AP12-201ENST00000419498 388 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC007283.2-201ENST00000424739 197 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC137499.1-201ENST00000427602 88 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC133104.1-201ENST00000429100 218 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RPL31P35-201ENST00000431058 377 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 MTCO2P11-201ENST00000431069 680 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AL358934.1-201ENST00000432346 324 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC119618.1-201ENST00000434191 222 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 USP9YP28-201ENST00000435142 589 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 MTND1P4-201ENST00000435196 415 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RPL26P6-201ENST00000440913 438 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC093899.1-201ENST00000457984 376 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CKAP4Q07065 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 RPS3AP17-201ENST00000472594 777 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RPS15AP36-201ENST00000492022 382 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.27□□□□□ -2.05
CKAP4Q07065 RNU6-506P-201ENST00000516553 94 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNA5SP364-201ENST00000516938 78 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 RNU6-64P-201ENST00000517119 105 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC090572.1-201ENST00000519251 160 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 HMGN1P28-201ENST00000521340 364 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms