Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL451054.2-201ENST00000420896 202 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 MTND2P5-201ENST00000432656 1006 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AL353706.1-201ENST00000436728 494 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AL135790.2-201ENST00000437701 267 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AC017099.1-201ENST00000448261 1028 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AC245517.4-201ENST00000448601 281 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 ARPC3P5-201ENST00000448802 534 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AC112771.1-201ENST00000463581 102 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.68□□□□□ -2.3
SSBP1Q04837 BOLA3P3-201ENST00000505182 232 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AC119751.5-201ENST00000514077 770 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 RNU6-528P-201ENST00000516926 100 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 RNA5SP290-201ENST00000517133 127 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.68□□□□□ -2.3
SSBP1Q04837 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.68□□□□□ -2.3
SSBP1Q04837 BNIP3P27-201ENST00000599991 412 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AL163051.2-201ENST00000618976 735 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AC004009.2-201ENST00000623016 728 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AC080188.3-201ENST00000624842 748 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.68□□□□□ -2.3
SSBP1Q04837 AL590396.4-201ENST00000636779 956 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 RBBP8P1-201ENST00000449447 1844 ntBASIC0.68□□□□□ -2.3
SSBP1Q04837 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SSBP1Q04837 RNU4-62P-201ENST00000410125 130 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 RNU2-28P-201ENST00000410457 189 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 MTCYBP38-201ENST00000417160 1123 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.67□□□□□ -2.3
SSBP1Q04837 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.67□□□□□ -2.3
SSBP1Q04837 AC010153.1-201ENST00000432862 727 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AC245047.4-201ENST00000433189 144 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 RPL32P28-201ENST00000443577 397 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 MOB1AP2-201ENST00000446060 614 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 CECR9-201ENST00000453421 199 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.67□□□□□ -2.3
SSBP1Q04837 RNU6-775P-201ENST00000459318 96 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.67□□□□□ -2.3
SSBP1Q04837 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.67□□□□□ -2.3
SSBP1Q04837 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.67□□□□□ -2.3
SSBP1Q04837 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.67□□□□□ -2.3
SSBP1Q04837 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.67□□□□□ -2.3
SSBP1Q04837 BNIP3P24-201ENST00000593398 557 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AC073544.2-201ENST00000601155 540 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AL158211.4-201ENST00000606988 584 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AC239868.4-201ENST00000608318 671 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 AC091965.5-201ENST00000624785 342 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 U6.101-201ENST00000637707 76 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SSBP1Q04837 MTCO1P9-201ENST00000505577 1534 ntBASIC0.67□□□□□ -2.3
SSBP1Q04837 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SSBP1Q04837 RNU1-17P-201ENST00000363022 152 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
SSBP1Q04837 RNU2-48P-201ENST00000410694 191 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 AC092634.6-201ENST00000418558 192 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 RPS27P16-201ENST00000425758 201 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 RPS4XP11-201ENST00000446897 772 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 VN1R10P-201ENST00000447106 875 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 snoU13.9-201ENST00000458927 103 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.66□□□□□ -2.3
SSBP1Q04837 AL160314.1-201ENST00000490836 438 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 SNORA48.9-201ENST00000516419 162 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 AC087441.2-201ENST00000529141 262 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 AC079598.5-201ENST00000547460 117 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 AC090115.3-201ENST00000553218 849 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.66□□□□□ -2.3
SSBP1Q04837 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.66□□□□□ -2.3
SSBP1Q04837 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.66□□□□□ -2.3
SSBP1Q04837 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.66□□□□□ -2.3
SSBP1Q04837 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.66□□□□□ -2.3
SSBP1Q04837 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.66□□□□□ -2.3
SSBP1Q04837 MTND5P11-201ENST00000511037 1812 ntBASIC0.66□□□□□ -2.3
SSBP1Q04837 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SSBP1Q04837 AL138713.1-201ENST00000624026 2130 ntBASIC0.65□□□□□ -2.3
SSBP1Q04837 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.65□□□□□ -2.3
SSBP1Q04837 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SSBP1Q04837 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SSBP1Q04837 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SSBP1Q04837 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SSBP1Q04837 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 SNORA25.8-201ENST00000364831 128 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 RNU6-796P-201ENST00000391086 107 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 CCNG1P1-201ENST00000406783 885 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 AC127391.1-201ENST00000411737 98 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 AL353621.1-201ENST00000418219 243 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 OOSP1P1-201ENST00000423265 274 ntBASIC0.65□□□□□ -2.31
SSBP1Q04837 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SSBP1Q04837 MTND1P28-201ENST00000435623 950 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms