Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC004825.2-201ENST00000616634 455 ntBASIC3.88□□□□□ -1.79
IRF9Q00978 AC007485.1-201ENST00000616755 206 ntBASIC3.88□□□□□ -1.79
IRF9Q00978 AL445567.2-201ENST00000618935 498 ntBASIC3.88□□□□□ -1.79
IRF9Q00978 AC091925.1-201ENST00000623204 462 ntBASIC3.88□□□□□ -1.79
IRF9Q00978 AC138627.2-201ENST00000624202 601 ntBASIC3.88□□□□□ -1.79
IRF9Q00978 U6.99-201ENST00000637524 83 ntBASIC3.88□□□□□ -1.79
IRF9Q00978 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
IRF9Q00978 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.88□□□□□ -1.79
IRF9Q00978 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
IRF9Q00978 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
IRF9Q00978 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
IRF9Q00978 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.87□□□□□ -1.79
IRF9Q00978 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.87□□□□□ -1.79
IRF9Q00978 AC006504.1-201ENST00000562493 3666 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
IRF9Q00978 RNA5SP130-201ENST00000364431 114 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 RNU6-1317P-201ENST00000364582 104 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 RNY1P14-201ENST00000384426 108 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 Y_RNA.496-201ENST00000384444 101 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 RNU4-6P-201ENST00000410804 122 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC096664.2-201ENST00000411843 406 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.87□□□□□ -1.79
IRF9Q00978 AC008267.5-201ENST00000424928 265 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AL160004.2-201ENST00000432935 350 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC011816.1-201ENST00000441346 546 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.87□□□□□ -1.79
IRF9Q00978 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
IRF9Q00978 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.87□□□□□ -1.79
IRF9Q00978 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.87□□□□□ -1.79
IRF9Q00978 AC133473.1-201ENST00000455173 299 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 RNU6-264P-201ENST00000517134 104 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 RNA5SP179-201ENST00000517284 121 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC109479.2-201ENST00000517842 174 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AP003730.1-201ENST00000524605 285 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.87□□□□□ -1.79
IRF9Q00978 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.87□□□□□ -1.79
IRF9Q00978 AC090877.1-201ENST00000561418 344 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
IRF9Q00978 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.87□□□□□ -1.79
IRF9Q00978 AL355598.1-201ENST00000604169 202 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AP000942.4-201ENST00000604811 241 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.87□□□□□ -1.79
IRF9Q00978 FTX_3.1-201ENST00000610451 147 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC006157.1-201ENST00000611750 366 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AL110115.1-201ENST00000614396 364 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 AC027309.3-201ENST00000623419 351 ntBASIC3.87□□□□□ -1.79
IRF9Q00978 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.87□□□□□ -1.79
IRF9Q00978 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
IRF9Q00978 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
IRF9Q00978 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
IRF9Q00978 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.87□□□□□ -1.79
IRF9Q00978 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
IRF9Q00978 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
IRF9Q00978 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
IRF9Q00978 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.86□□□□□ -1.79
IRF9Q00978 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
IRF9Q00978 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
IRF9Q00978 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
IRF9Q00978 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
IRF9Q00978 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.86□□□□□ -1.79
IRF9Q00978 RNU1-18P-201ENST00000363062 164 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 Y_RNA.158-201ENST00000363651 101 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 RN7SKP227-201ENST00000364445 330 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 Y_RNA.364-201ENST00000365532 101 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.86□□□□□ -1.79
IRF9Q00978 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
IRF9Q00978 Y_RNA.428-201ENST00000384078 102 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 MRPL42P3-201ENST00000401492 326 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.86□□□□□ -1.79
IRF9Q00978 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.86□□□□□ -1.79
IRF9Q00978 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.86□□□□□ -1.79
IRF9Q00978 BX276092.3-201ENST00000424182 230 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.86□□□□□ -1.79
IRF9Q00978 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 MTND3P2-201ENST00000438452 342 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.86□□□□□ -1.79
IRF9Q00978 MTND5P22-201ENST00000458380 195 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 FTH1P2-201ENST00000466086 412 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.86□□□□□ -1.79
IRF9Q00978 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 TRBV12-2-201ENST00000489763 344 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.86□□□□□ -1.79
IRF9Q00978 RNU6-1046P-201ENST00000516538 107 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 Y_RNA.687-201ENST00000516558 91 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 RNU6-703P-201ENST00000516946 107 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 RNU6-1137P-201ENST00000517073 99 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 Y_RNA.720-201ENST00000517166 92 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
IRF9Q00978 AC023442.1-201ENST00000531247 422 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 TOMM20P2-201ENST00000540082 421 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 YPEL5P3-201ENST00000547227 352 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 AC136624.4-201ENST00000573044 370 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 MIR4782-201ENST00000577987 79 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 MIR4680-201ENST00000580906 66 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 AC018889.1-201ENST00000605372 397 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 BRDTP1-201ENST00000605735 677 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 MIR3976-201ENST00000606807 139 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 MIR6716-201ENST00000613413 80 ntBASIC3.86□□□□□ -1.79
IRF9Q00978 AC008121.3-201ENST00000618726 433 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms