Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBA52P62987 AL391516.1-201ENST00000554380 2449 ntBASIC0.73□□□□□ -2.29
UBA52P62987 Y_RNA.205-201ENST00000364128 113 ntBASIC0.73□□□□□ -2.29
UBA52P62987 RNA5SP240-201ENST00000365355 128 ntBASIC0.73□□□□□ -2.29
UBA52P62987 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
UBA52P62987 HMGB1P17-201ENST00000403495 628 ntBASIC0.73□□□□□ -2.29
UBA52P62987 MIR1283-2-201ENST00000408621 87 ntBASIC0.73□□□□□ -2.29
UBA52P62987 RN7SKP61-201ENST00000410642 295 ntBASIC0.73□□□□□ -2.29
UBA52P62987 TPMTP3-201ENST00000411928 735 ntBASIC0.73□□□□□ -2.29
UBA52P62987 CYCSP33-201ENST00000414485 327 ntBASIC0.73□□□□□ -2.29
UBA52P62987 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.73□□□□□ -2.29
UBA52P62987 AC008850.1-201ENST00000427546 362 ntBASIC0.73□□□□□ -2.29
UBA52P62987 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.73□□□□□ -2.29
UBA52P62987 RNU6-1132P-201ENST00000459214 107 ntBASIC0.73□□□□□ -2.29
UBA52P62987 RPL30P7-201ENST00000479312 323 ntBASIC0.73□□□□□ -2.29
UBA52P62987 LARP1BP2-201ENST00000486594 519 ntBASIC0.73□□□□□ -2.29
UBA52P62987 OR9N1P-202ENST00000494289 481 ntBASIC0.73□□□□□ -2.29
UBA52P62987 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.73□□□□□ -2.29
UBA52P62987 AC004775.1-201ENST00000607389 753 ntBASIC0.73□□□□□ -2.29
UBA52P62987 AC117490.2-201ENST00000610042 594 ntBASIC0.73□□□□□ -2.29
UBA52P62987 AL355472.4-201ENST00000610233 626 ntBASIC0.73□□□□□ -2.29
UBA52P62987 U6.107-201ENST00000637108 79 ntBASIC0.73□□□□□ -2.29
UBA52P62987 MIR216A-201ENST00000385063 110 ntBASIC0.72□□□□□ -2.29
UBA52P62987 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.72□□□□□ -2.29
UBA52P62987 CBX3P6-201ENST00000430257 527 ntBASIC0.72□□□□□ -2.29
UBA52P62987 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.72□□□□□ -2.29
UBA52P62987 AL133373.1-201ENST00000497098 94 ntBASIC0.72□□□□□ -2.29
UBA52P62987 SNORD116-30-201ENST00000516468 85 ntBASIC0.72□□□□□ -2.29
UBA52P62987 AP003122.4-201ENST00000530980 758 ntBASIC0.72□□□□□ -2.29
UBA52P62987 CR383656.8-201ENST00000549046 145 ntBASIC0.72□□□□□ -2.29
UBA52P62987 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.72□□□□□ -2.29
UBA52P62987 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
UBA52P62987 MTND4LP5-201ENST00000605152 292 ntBASIC0.72□□□□□ -2.29
UBA52P62987 BX322635.1-201ENST00000605804 496 ntBASIC0.72□□□□□ -2.29
UBA52P62987 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
UBA52P62987 MIR6130-201ENST00000619419 109 ntBASIC0.72□□□□□ -2.29
UBA52P62987 AL118508.4-201ENST00000624142 1176 ntBASIC0.72□□□□□ -2.29
UBA52P62987 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
UBA52P62987 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
UBA52P62987 SNORA25B-201ENST00000365507 128 ntBASIC0.71□□□□□ -2.3
UBA52P62987 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
UBA52P62987 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
UBA52P62987 RNU6-444P-201ENST00000383988 108 ntBASIC0.71□□□□□ -2.3
UBA52P62987 RNU6-17P-201ENST00000384245 107 ntBASIC0.71□□□□□ -2.3
UBA52P62987 RNU6-18P-201ENST00000384527 107 ntBASIC0.71□□□□□ -2.3
UBA52P62987 RNY1P4-201ENST00000384595 115 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
UBA52P62987 FABP5P14-201ENST00000437273 393 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.71□□□□□ -2.3
UBA52P62987 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.71□□□□□ -2.3
UBA52P62987 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
UBA52P62987 UBL5P1-201ENST00000507979 193 ntBASIC0.71□□□□□ -2.3
UBA52P62987 RNU6-27P-201ENST00000516146 107 ntBASIC0.71□□□□□ -2.3
UBA52P62987 RNU7-40P-201ENST00000516397 64 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.71□□□□□ -2.3
UBA52P62987 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
UBA52P62987 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.71□□□□□ -2.3
UBA52P62987 AC233266.2-201ENST00000567067 528 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AL022067.1-201ENST00000602426 454 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AC010900.2-201ENST00000604508 210 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AL161729.4-201ENST00000604650 476 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.71□□□□□ -2.3
UBA52P62987 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.71□□□□□ -2.3
UBA52P62987 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
UBA52P62987 MIR8074-201ENST00000615081 81 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AL391597.1-201ENST00000618707 694 ntBASIC0.71□□□□□ -2.3
UBA52P62987 MIR5739-201ENST00000619803 80 ntBASIC0.71□□□□□ -2.3
UBA52P62987 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
UBA52P62987 AL121890.5-201ENST00000620848 304 ntBASIC0.71□□□□□ -2.3
UBA52P62987 AC018630.2-201ENST00000534866 2403 ntBASIC0.7□□□□□ -2.3
UBA52P62987 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.7□□□□□ -2.3
UBA52P62987 RNU6-251P-201ENST00000363235 104 ntBASIC0.7□□□□□ -2.3
UBA52P62987 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBA52P62987 MIR515-2-201ENST00000384883 83 ntBASIC0.7□□□□□ -2.3
UBA52P62987 MIR515-1-201ENST00000384884 83 ntBASIC0.7□□□□□ -2.3
UBA52P62987 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.7□□□□□ -2.3
UBA52P62987 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.7□□□□□ -2.3
UBA52P62987 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.7□□□□□ -2.3
UBA52P62987 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.7□□□□□ -2.3
UBA52P62987 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.7□□□□□ -2.3
UBA52P62987 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.7□□□□□ -2.3
UBA52P62987 RPL26P6-201ENST00000440913 438 ntBASIC0.7□□□□□ -2.3
UBA52P62987 TPRKBP1-201ENST00000456243 481 ntBASIC0.7□□□□□ -2.3
UBA52P62987 RPL26P9-201ENST00000457466 433 ntBASIC0.7□□□□□ -2.3
UBA52P62987 snoU13.9-201ENST00000458927 103 ntBASIC0.7□□□□□ -2.3
UBA52P62987 AC015724.1-201ENST00000478577 156 ntBASIC0.7□□□□□ -2.3
UBA52P62987 AC109927.2-201ENST00000506416 303 ntBASIC0.7□□□□□ -2.3
UBA52P62987 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.7□□□□□ -2.3
UBA52P62987 SUB1P4-201ENST00000566062 339 ntBASIC0.7□□□□□ -2.3
UBA52P62987 AC005730.3-201ENST00000583067 366 ntBASIC0.7□□□□□ -2.3
UBA52P62987 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.7□□□□□ -2.3
UBA52P62987 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.69□□□□□ -2.3
UBA52P62987 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.69□□□□□ -2.3
UBA52P62987 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
UBA52P62987 RNU6-921P-201ENST00000384361 107 ntBASIC0.69□□□□□ -2.3
UBA52P62987 RNU6-1151P-201ENST00000384684 107 ntBASIC0.69□□□□□ -2.3
UBA52P62987 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
UBA52P62987 RNU6-233P-201ENST00000410845 141 ntBASIC0.69□□□□□ -2.3
UBA52P62987 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.69□□□□□ -2.3
UBA52P62987 LINC01347-201ENST00000417964 355 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms