Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.56□□□□□ -2
RIPK4P57078 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
RIPK4P57078 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.56□□□□□ -2
RIPK4P57078 SNRPGP6-201ENST00000451124 220 ntBASIC2.56□□□□□ -2
RIPK4P57078 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
RIPK4P57078 AC022447.3-201ENST00000506865 495 ntBASIC2.56□□□□□ -2
RIPK4P57078 MTND3P5-201ENST00000512798 333 ntBASIC2.56□□□□□ -2
RIPK4P57078 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.56□□□□□ -2
RIPK4P57078 RNU6-1256P-201ENST00000516539 103 ntBASIC2.56□□□□□ -2
RIPK4P57078 MIR514B-201ENST00000516774 80 ntBASIC2.56□□□□□ -2
RIPK4P57078 RNU1-40P-201ENST00000516816 164 ntBASIC2.56□□□□□ -2
RIPK4P57078 RNU1-97P-201ENST00000516872 164 ntBASIC2.56□□□□□ -2
RIPK4P57078 NRON-201ENST00000517270 370 ntBASIC2.56□□□□□ -2
RIPK4P57078 AP002963.1-201ENST00000530590 184 ntBASIC2.56□□□□□ -2
RIPK4P57078 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.56□□□□□ -2
RIPK4P57078 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.56□□□□□ -2
RIPK4P57078 PCMTD1P2-201ENST00000565017 355 ntBASIC2.56□□□□□ -2
RIPK4P57078 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.56□□□□□ -2
RIPK4P57078 AL158827.2-201ENST00000602494 330 ntBASIC2.56□□□□□ -2
RIPK4P57078 AC136601.2-201ENST00000604356 474 ntBASIC2.56□□□□□ -2
RIPK4P57078 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.56□□□□□ -2
RIPK4P57078 AC025594.3-201ENST00000613068 790 ntBASIC2.56□□□□□ -2
RIPK4P57078 AL691447.3-201ENST00000635020 330 ntBASIC2.56□□□□□ -2
RIPK4P57078 MTND5P33-201ENST00000571250 1450 ntBASIC2.56□□□□□ -2
RIPK4P57078 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.56□□□□□ -2
RIPK4P57078 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.56□□□□□ -2
RIPK4P57078 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
RIPK4P57078 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.56□□□□□ -2
RIPK4P57078 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.55□□□□□ -2
RIPK4P57078 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RIPK4P57078 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RIPK4P57078 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.55□□□□□ -2
RIPK4P57078 RNU6-769P-201ENST00000384407 104 ntBASIC2.55□□□□□ -2
RIPK4P57078 RNU6-1035P-201ENST00000384477 107 ntBASIC2.55□□□□□ -2
RIPK4P57078 MIR627-201ENST00000384979 97 ntBASIC2.55□□□□□ -2
RIPK4P57078 MIR320C1-201ENST00000408566 88 ntBASIC2.55□□□□□ -2
RIPK4P57078 Z85995.1-201ENST00000415547 335 ntBASIC2.55□□□□□ -2
RIPK4P57078 ZNF885P-201ENST00000420174 1098 ntBASIC2.55□□□□□ -2
RIPK4P57078 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.55□□□□□ -2
RIPK4P57078 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.55□□□□□ -2
RIPK4P57078 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.55□□□□□ -2
RIPK4P57078 MTND4P4-201ENST00000439033 1366 ntBASIC2.55□□□□□ -2
RIPK4P57078 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.55□□□□□ -2
RIPK4P57078 BNIP3P2-201ENST00000441221 577 ntBASIC2.55□□□□□ -2
RIPK4P57078 AL022238.1-201ENST00000442557 355 ntBASIC2.55□□□□□ -2
RIPK4P57078 BMI1P1-201ENST00000445879 941 ntBASIC2.55□□□□□ -2
RIPK4P57078 TPT1P7-201ENST00000458300 517 ntBASIC2.55□□□□□ -2
RIPK4P57078 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.55□□□□□ -2
RIPK4P57078 RPS20P20-201ENST00000460498 340 ntBASIC2.55□□□□□ -2
RIPK4P57078 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.55□□□□□ -2
RIPK4P57078 AF131216.2-201ENST00000512316 564 ntBASIC2.55□□□□□ -2
RIPK4P57078 HMGN1P28-201ENST00000521340 364 ntBASIC2.55□□□□□ -2
RIPK4P57078 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.55□□□□□ -2
RIPK4P57078 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.55□□□□□ -2
RIPK4P57078 AP004247.1-201ENST00000531556 1289 ntBASIC2.55□□□□□ -2
RIPK4P57078 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.55□□□□□ -2
RIPK4P57078 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.55□□□□□ -2
RIPK4P57078 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.55□□□□□ -2
RIPK4P57078 MIR5697-201ENST00000578045 78 ntBASIC2.55□□□□□ -2
RIPK4P57078 MIR4307-201ENST00000582802 84 ntBASIC2.55□□□□□ -2
RIPK4P57078 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.55□□□□□ -2
RIPK4P57078 BNIP3P23-201ENST00000599655 511 ntBASIC2.55□□□□□ -2
RIPK4P57078 APOOP1-201ENST00000604695 592 ntBASIC2.55□□□□□ -2
RIPK4P57078 AC010678.1-201ENST00000614118 713 ntBASIC2.55□□□□□ -2
RIPK4P57078 TUG1_2.1-201ENST00000614234 87 ntBASIC2.55□□□□□ -2
RIPK4P57078 AC092656.1-203ENST00000624134 423 ntBASIC2.55□□□□□ -2
RIPK4P57078 AC025048.6-202ENST00000627667 438 ntBASIC2.55□□□□□ -2
RIPK4P57078 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.55□□□□□ -2
RIPK4P57078 OR5H6-203ENST00000642105 978 ntBASIC2.55□□□□□ -2
RIPK4P57078 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RIPK4P57078 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
RIPK4P57078 RNA5SP37-201ENST00000365420 130 ntBASIC2.54□□□□□ -2
RIPK4P57078 RNU6-741P-201ENST00000383889 107 ntBASIC2.54□□□□□ -2
RIPK4P57078 RNU6-297P-201ENST00000384636 107 ntBASIC2.54□□□□□ -2
RIPK4P57078 RNY3P10-201ENST00000384764 102 ntBASIC2.54□□□□□ -2
RIPK4P57078 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
RIPK4P57078 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.54□□□□□ -2
RIPK4P57078 RPL7L1P10-201ENST00000427790 463 ntBASIC2.54□□□□□ -2
RIPK4P57078 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.54□□□□□ -2
RIPK4P57078 AL512844.2-201ENST00000433990 593 ntBASIC2.54□□□□□ -2
RIPK4P57078 AL714022.1-201ENST00000439897 151 ntBASIC2.54□□□□□ -2
RIPK4P57078 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 RNU6-956P-201ENST00000458868 103 ntBASIC2.54□□□□□ -2
RIPK4P57078 RPS20P22-201ENST00000473700 357 ntBASIC2.54□□□□□ -2
RIPK4P57078 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 CDC42P4-201ENST00000510507 563 ntBASIC2.54□□□□□ -2
RIPK4P57078 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 AP003033.1-201ENST00000527244 415 ntBASIC2.54□□□□□ -2
RIPK4P57078 OR5AQ1P-201ENST00000527596 927 ntBASIC2.54□□□□□ -2
RIPK4P57078 AC068587.4-201ENST00000533893 186 ntBASIC2.54□□□□□ -2
RIPK4P57078 TRAV28-201ENST00000557548 323 ntBASIC2.54□□□□□ -2
RIPK4P57078 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 RPS3AP23-202ENST00000574601 686 ntBASIC2.54□□□□□ -2
RIPK4P57078 AC005951.2-201ENST00000576282 495 ntBASIC2.54□□□□□ -2
RIPK4P57078 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.54□□□□□ -2
RIPK4P57078 MIR3611-201ENST00000584484 83 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms