Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-960P-201ENST00000364056 120 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 U3.12-201ENST00000364498 214 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 SNORA4.3-201ENST00000365564 137 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 RNU6-946P-201ENST00000383878 107 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PKNOX1P55347 RNU6-920P-201ENST00000410926 92 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.14□□□□□ -2.07
PKNOX1P55347 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.14□□□□□ -2.07
PKNOX1P55347 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PKNOX1P55347 IPO7P1-201ENST00000442031 636 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.14□□□□□ -2.07
PKNOX1P55347 AC092001.1-201ENST00000453012 261 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.14□□□□□ -2.07
PKNOX1P55347 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AP000797.1-201ENST00000478870 387 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 RNU6-581P-201ENST00000516214 105 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 RNU2-10P-201ENST00000516375 211 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 RNU6-914P-201ENST00000516749 109 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AP001646.1-201ENST00000527936 915 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.14□□□□□ -2.07
PKNOX1P55347 AC135628.1-201ENST00000568867 534 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 RPS3AP23-202ENST00000574601 686 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 MIR3167-201ENST00000579623 85 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AC090616.2-202ENST00000584248 222 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AL022161.1-201ENST00000604390 213 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AC018638.7-201ENST00000605836 1114 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AC025034.2-201ENST00000623264 286 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 AL512643.1-201ENST00000635735 524 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.14□□□□□ -2.07
PKNOX1P55347 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.14□□□□□ -2.07
PKNOX1P55347 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.14□□□□□ -2.07
PKNOX1P55347 ZNF658B-202ENST00000615961 3375 ntBASIC2.14□□□□□ -2.07
PKNOX1P55347 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PKNOX1P55347 CDC27P3-201ENST00000635418 1910 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PKNOX1P55347 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.13□□□□□ -2.07
PKNOX1P55347 SNORA38-201ENST00000363946 132 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 HMGB3P2-201ENST00000411913 584 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC005005.2-201ENST00000420779 380 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC006366.1-201ENST00000422002 759 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC007283.2-201ENST00000424739 197 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AL591704.1-201ENST00000432574 275 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC004383.1-201ENST00000438135 289 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AL139824.2-201ENST00000458731 1095 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 RNU7-125P-201ENST00000458760 62 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.13□□□□□ -2.07
PKNOX1P55347 AC126389.1-201ENST00000477436 290 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PKNOX1P55347 AC023141.11-201ENST00000508864 202 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC025755.1-201ENST00000521306 278 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.13□□□□□ -2.07
PKNOX1P55347 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.13□□□□□ -2.07
PKNOX1P55347 AC008015.1-201ENST00000555505 465 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.13□□□□□ -2.07
PKNOX1P55347 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.13□□□□□ -2.07
PKNOX1P55347 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.13□□□□□ -2.07
PKNOX1P55347 MIR3199-1-201ENST00000582434 88 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 NRBF2P1-201ENST00000587407 859 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.13□□□□□ -2.07
PKNOX1P55347 WISP1-OT1-201ENST00000602893 642 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 MIR6134-201ENST00000617606 109 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 FRG1KP-201ENST00000623592 341 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 U6.99-201ENST00000637524 83 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 AC099654.13-201ENST00000639774 207 ntBASIC2.13□□□□□ -2.07
PKNOX1P55347 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
PKNOX1P55347 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
PKNOX1P55347 MTND5P30-201ENST00000452896 1731 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PKNOX1P55347 HSPE1P11-201ENST00000339579 310 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNU5E-5P-201ENST00000365379 116 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AL356583.2-201ENST00000426536 280 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 MYL8P-204ENST00000431574 518 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.12□□□□□ -2.07
PKNOX1P55347 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 AC093899.1-201ENST00000457984 376 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC080013.2-201ENST00000460866 323 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RPL30P6-201ENST00000475925 342 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC109486.1-201ENST00000486833 374 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC007182.2-201ENST00000489251 402 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC010587.1-201ENST00000505809 469 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC109927.2-201ENST00000506416 303 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNU6-572P-201ENST00000516724 80 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNU6-677P-201ENST00000516914 101 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNU6-143P-201ENST00000516942 93 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNU6-1315P-201ENST00000517187 99 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC011979.2-201ENST00000527568 352 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PKNOX1P55347 OR5B19P-201ENST00000531766 928 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms