Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SNORA71.3-201ENST00000362582 128 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXG1P55316 SMIM11P1-201ENST00000369586 178 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FOXG1P55316 Y_RNA.489-201ENST00000384410 101 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 Y_RNA.493-201ENST00000384422 102 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RNU6-821P-201ENST00000390995 107 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RNA5SP171-201ENST00000391071 115 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 HMGN2P8-201ENST00000391458 268 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 MIR548I3-201ENST00000408378 149 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 MIR548I1-201ENST00000408810 149 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RPL21P109-201ENST00000422213 475 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXG1P55316 HMGB1P9-201ENST00000429856 646 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 USP9YP30-201ENST00000430729 455 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RPL21P112-201ENST00000434403 463 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 DYNLT3P2-201ENST00000442517 295 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RPS3AP46-201ENST00000448352 682 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 AC087884.1-201ENST00000469738 328 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RPL21P129-201ENST00000491732 478 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RPL22P13-201ENST00000493291 347 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 SLC25A15P5-201ENST00000508033 253 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AC116655.1-201ENST00000508324 901 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXG1P55316 Y_RNA.680-201ENST00000516441 93 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RNU6-685P-201ENST00000517088 95 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 RNU6-323P-201ENST00000521915 107 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 DEFB108D-201ENST00000527787 222 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXG1P55316 HMGB1P50-201ENST00000605814 607 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 SNORD58B-201ENST00000607313 66 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AL391261.4-201ENST00000616012 481 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXG1P55316 AL589994.2-201ENST00000621124 579 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXG1P55316 U6.98-201ENST00000637157 84 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AC009093.8-201ENST00000641769 292 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FOXG1P55316 GABPAP-201ENST00000419271 1356 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXG1P55316 FAM35DP-201ENST00000323387 2712 ntBASIC3.19□□□□□ -1.9
FOXG1P55316 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXG1P55316 AF127577.6-201ENST00000623352 2191 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FOXG1P55316 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXG1P55316 RNU6-1059P-201ENST00000363752 98 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNU6-946P-201ENST00000383878 107 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNU6-393P-201ENST00000384475 107 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNU6-95P-201ENST00000384697 107 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 MIR23B-201ENST00000384832 97 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AL139039.1-201ENST00000401900 692 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNU6-387P-201ENST00000411331 105 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 AC093578.1-201ENST00000415219 368 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RPLP0P7-201ENST00000416050 667 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AC243428.1-201ENST00000421099 264 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 MRPS18CP6-201ENST00000423587 223 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RPL23AP50-201ENST00000434149 455 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 MRPS18BP2-201ENST00000434310 759 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.18□□□□□ -1.9
FOXG1P55316 HSPD1P21-201ENST00000436541 245 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.18□□□□□ -1.9
FOXG1P55316 FABP5P13-201ENST00000452144 328 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AL353752.1-201ENST00000454946 260 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXG1P55316 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 SNRPGP3-201ENST00000469405 227 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AC106707.2-201ENST00000484182 374 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 RN7SKP18-201ENST00000516005 275 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNY3P15-201ENST00000516297 97 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNU4-77P-201ENST00000516692 156 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RN7SKP209-201ENST00000516888 304 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 RNA5SP143-201ENST00000516936 115 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FOXG1P55316 GNAI2P1-201ENST00000541815 315 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXG1P55316 AC011494.1-201ENST00000596454 237 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AL158032.1-201ENST00000605401 106 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 MIR486-1-201ENST00000612171 68 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 AC243312.2-201ENST00000623340 601 ntBASIC3.18□□□□□ -1.9
FOXG1P55316 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXG1P55316 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms