Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-1025P-201ENST00000410629 104 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH12P55289 RPL23AP69-201ENST00000431134 458 ntBASIC3.08□□□□□ -1.92
CDH12P55289 MYL8P-204ENST00000431574 518 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL512844.2-201ENST00000433990 593 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AC007389.2-201ENST00000434630 306 ntBASIC3.08□□□□□ -1.92
CDH12P55289 CST9LP2-201ENST00000437612 320 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 RBMY2UP-201ENST00000453474 324 ntBASIC3.08□□□□□ -1.92
CDH12P55289 PPP1R2P5-201ENST00000457256 603 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 FGF7P4-201ENST00000509595 295 ntBASIC3.08□□□□□ -1.92
CDH12P55289 SNORA19.2-201ENST00000516013 114 ntBASIC3.08□□□□□ -1.92
CDH12P55289 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
CDH12P55289 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH12P55289 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH12P55289 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 AC004805.2-201ENST00000605382 482 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AC002044.1-201ENST00000606707 158 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL132765.2-201ENST00000610812 351 ntBASIC3.08□□□□□ -1.92
CDH12P55289 FAM157A-202ENST00000615155 405 ntBASIC3.08□□□□□ -1.92
CDH12P55289 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
CDH12P55289 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
CDH12P55289 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH12P55289 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH12P55289 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH12P55289 ZNF807-201ENST00000328088 1707 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH12P55289 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH12P55289 AC093908.1-201ENST00000623125 8092 ntBASIC3.07□□□□□ -1.92
CDH12P55289 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH12P55289 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH12P55289 MIR148B-201ENST00000362252 99 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU4-35P-201ENST00000362588 141 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU4-73P-201ENST00000363164 141 ntBASIC3.07□□□□□ -1.92
CDH12P55289 SNORD113-7-201ENST00000363762 77 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU6-395P-201ENST00000365662 106 ntBASIC3.07□□□□□ -1.92
CDH12P55289 Y_RNA.509-201ENST00000384506 99 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU6-1179P-201ENST00000384667 107 ntBASIC3.07□□□□□ -1.92
CDH12P55289 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH12P55289 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH12P55289 CYCSP33-201ENST00000414485 327 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH12P55289 HMGB1P18-201ENST00000438801 619 ntBASIC3.07□□□□□ -1.92
CDH12P55289 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH12P55289 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH12P55289 AC115115.1-201ENST00000449927 248 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH12P55289 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH12P55289 FCF1P8-201ENST00000510322 597 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU1-61P-201ENST00000516107 151 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU1-86P-201ENST00000516108 154 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU6-1069P-201ENST00000516612 133 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU1-107P-201ENST00000516617 154 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RNU6-1088P-201ENST00000516850 104 ntBASIC3.07□□□□□ -1.92
CDH12P55289 SNORA25.17-201ENST00000517184 124 ntBASIC3.07□□□□□ -1.92
CDH12P55289 IGKV2-26-201ENST00000518305 343 ntBASIC3.07□□□□□ -1.92
CDH12P55289 TRMT10BP1-201ENST00000519377 943 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH12P55289 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.07□□□□□ -1.92
CDH12P55289 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH12P55289 MIR3672-201ENST00000584290 82 ntBASIC3.07□□□□□ -1.92
CDH12P55289 MIR5692C1-201ENST00000585309 91 ntBASIC3.07□□□□□ -1.92
CDH12P55289 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH12P55289 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH12P55289 AL670379.10-201ENST00000604330 253 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AL670379.9-201ENST00000605428 253 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AC087045.1-201ENST00000605856 382 ntBASIC3.07□□□□□ -1.92
CDH12P55289 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.07□□□□□ -1.92
CDH12P55289 RMST_7.1-201ENST00000621935 268 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AC027309.3-201ENST00000623419 351 ntBASIC3.07□□□□□ -1.92
CDH12P55289 AC073544.1-201ENST00000600110 1595 ntBASIC3.07□□□□□ -1.92
CDH12P55289 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH12P55289 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH12P55289 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH12P55289 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH12P55289 AC090740.1-201ENST00000623193 2262 ntBASIC3.07□□□□□ -1.92
CDH12P55289 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH12P55289 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH12P55289 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH12P55289 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH12P55289 FTLP6-201ENST00000355274 422 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU6-140P-201ENST00000384566 108 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL591034.1-201ENST00000407447 340 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU2-3P-201ENST00000410144 191 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU6-607P-201ENST00000411283 108 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RPL32P35-201ENST00000415214 394 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 AL353621.1-201ENST00000418219 243 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms