Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.53□□□□□ -2
SMSP52788 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
SMSP52788 Y_RNA.33-201ENST00000362591 102 ntBASIC2.53□□□□□ -2
SMSP52788 Y_RNA.169-201ENST00000363745 96 ntBASIC2.53□□□□□ -2
SMSP52788 RNY1P12-201ENST00000364251 105 ntBASIC2.53□□□□□ -2
SMSP52788 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMSP52788 RNU6-19P-201ENST00000384718 107 ntBASIC2.53□□□□□ -2
SMSP52788 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
SMSP52788 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SMSP52788 RNU2-39P-201ENST00000410604 198 ntBASIC2.53□□□□□ -2
SMSP52788 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.53□□□□□ -2
SMSP52788 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.53□□□□□ -2
SMSP52788 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.53□□□□□ -2
SMSP52788 MTND2P18-201ENST00000419962 1030 ntBASIC2.53□□□□□ -2
SMSP52788 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.53□□□□□ -2
SMSP52788 PTGES3P4-201ENST00000426243 356 ntBASIC2.53□□□□□ -2
SMSP52788 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
SMSP52788 ARL5AP4-201ENST00000430731 512 ntBASIC2.53□□□□□ -2
SMSP52788 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.53□□□□□ -2
SMSP52788 AC009961.2-201ENST00000435771 251 ntBASIC2.53□□□□□ -2
SMSP52788 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.53□□□□□ -2
SMSP52788 snoU109.1-201ENST00000459339 135 ntBASIC2.53□□□□□ -2
SMSP52788 SNORD42A-201ENST00000459584 64 ntBASIC2.53□□□□□ -2
SMSP52788 EIF4EP3-201ENST00000498782 656 ntBASIC2.53□□□□□ -2
SMSP52788 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.53□□□□□ -2
SMSP52788 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.53□□□□□ -2
SMSP52788 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.53□□□□□ -2
SMSP52788 SNORA31.19-201ENST00000517079 126 ntBASIC2.53□□□□□ -2
SMSP52788 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.53□□□□□ -2
SMSP52788 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.53□□□□□ -2
SMSP52788 MIR3167-201ENST00000579623 85 ntBASIC2.53□□□□□ -2
SMSP52788 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.53□□□□□ -2
SMSP52788 AC068276.1-201ENST00000605793 379 ntBASIC2.53□□□□□ -2
SMSP52788 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
SMSP52788 PISRT1-201ENST00000626175 531 ntBASIC2.53□□□□□ -2
SMSP52788 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMSP52788 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMSP52788 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SMSP52788 MTND4P27-201ENST00000450813 1354 ntBASIC2.52□□□□□ -2.01
SMSP52788 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SMSP52788 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SMSP52788 FGF7P2-201ENST00000332473 296 ntBASIC2.52□□□□□ -2.01
SMSP52788 RNU6-166P-201ENST00000384371 107 ntBASIC2.52□□□□□ -2.01
SMSP52788 RNU6-748P-201ENST00000384648 107 ntBASIC2.52□□□□□ -2.01
SMSP52788 MIR518D-201ENST00000385014 87 ntBASIC2.52□□□□□ -2.01
SMSP52788 SNORA26.8-201ENST00000391306 124 ntBASIC2.52□□□□□ -2.01
SMSP52788 AL139095.1-201ENST00000404326 391 ntBASIC2.52□□□□□ -2.01
SMSP52788 MIR1261-201ENST00000408659 82 ntBASIC2.52□□□□□ -2.01
SMSP52788 RNU6-1025P-201ENST00000410629 104 ntBASIC2.52□□□□□ -2.01
SMSP52788 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.52□□□□□ -2.01
SMSP52788 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.52□□□□□ -2.01
SMSP52788 AL078601.1-201ENST00000444542 271 ntBASIC2.52□□□□□ -2.01
SMSP52788 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.52□□□□□ -2.01
SMSP52788 AL033528.1-201ENST00000453780 140 ntBASIC2.52□□□□□ -2.01
SMSP52788 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.52□□□□□ -2.01
SMSP52788 AC117522.1-201ENST00000509821 380 ntBASIC2.52□□□□□ -2.01
SMSP52788 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.52□□□□□ -2.01
SMSP52788 BTF3P12-201ENST00000519620 469 ntBASIC2.52□□□□□ -2.01
SMSP52788 OR5BN1P-201ENST00000532955 829 ntBASIC2.52□□□□□ -2.01
SMSP52788 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.52□□□□□ -2.01
SMSP52788 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.52□□□□□ -2.01
SMSP52788 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
SMSP52788 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.52□□□□□ -2.01
SMSP52788 AC005771.1-201ENST00000585581 349 ntBASIC2.52□□□□□ -2.01
SMSP52788 AC008121.1-201ENST00000603244 268 ntBASIC2.52□□□□□ -2.01
SMSP52788 Z94722.1-201ENST00000604328 474 ntBASIC2.52□□□□□ -2.01
SMSP52788 AL139286.2-201ENST00000606838 396 ntBASIC2.52□□□□□ -2.01
SMSP52788 AP001506.1-201ENST00000615444 211 ntBASIC2.52□□□□□ -2.01
SMSP52788 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMSP52788 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.52□□□□□ -2.01
SMSP52788 FARSBP1-201ENST00000435808 1778 ntBASIC2.51□□□□□ -2.01
SMSP52788 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMSP52788 Y_RNA.22-201ENST00000362492 102 ntBASIC2.51□□□□□ -2.01
SMSP52788 RNU6-169P-201ENST00000365336 107 ntBASIC2.51□□□□□ -2.01
SMSP52788 SNORA20.2-201ENST00000383922 131 ntBASIC2.51□□□□□ -2.01
SMSP52788 RNU2-52P-201ENST00000410680 190 ntBASIC2.51□□□□□ -2.01
SMSP52788 NPM1P11-201ENST00000417106 855 ntBASIC2.51□□□□□ -2.01
SMSP52788 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
SMSP52788 AC104389.3-201ENST00000445629 235 ntBASIC2.51□□□□□ -2.01
SMSP52788 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMSP52788 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMSP52788 AC098826.2-201ENST00000452011 651 ntBASIC2.51□□□□□ -2.01
SMSP52788 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.51□□□□□ -2.01
SMSP52788 AC080013.2-201ENST00000460866 323 ntBASIC2.51□□□□□ -2.01
SMSP52788 MTND3P7-201ENST00000474435 343 ntBASIC2.51□□□□□ -2.01
SMSP52788 Vault.3-201ENST00000516676 95 ntBASIC2.51□□□□□ -2.01
SMSP52788 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
SMSP52788 AC091544.4-201ENST00000555268 342 ntBASIC2.51□□□□□ -2.01
SMSP52788 AC234778.2-201ENST00000566241 354 ntBASIC2.51□□□□□ -2.01
SMSP52788 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.51□□□□□ -2.01
SMSP52788 NRBF2P1-201ENST00000587407 859 ntBASIC2.51□□□□□ -2.01
SMSP52788 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SMSP52788 AC091931.1-201ENST00000623488 728 ntBASIC2.51□□□□□ -2.01
SMSP52788 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.51□□□□□ -2.01
SMSP52788 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMSP52788 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMSP52788 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMSP52788 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMSP52788 AL109809.4-201ENST00000603520 2185 ntBASIC2.5□□□□□ -2.01
SMSP52788 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms