Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MIR4421-201ENST00000578133 69 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH6P52701 AC011458.1-201ENST00000604034 617 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AC097468.3-201ENST00000607956 456 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AC024933.1-201ENST00000608472 348 ntBASIC2.32□□□□□ -2.04
MSH6P52701 RMST_6.1-201ENST00000611980 203 ntBASIC2.32□□□□□ -2.04
MSH6P52701 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MSH6P52701 AC004852.3-201ENST00000614131 326 ntBASIC2.32□□□□□ -2.04
MSH6P52701 MIR6779-201ENST00000617283 64 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AL356596.1-201ENST00000624230 379 ntBASIC2.32□□□□□ -2.04
MSH6P52701 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.32□□□□□ -2.04
MSH6P52701 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MSH6P52701 RNU6-433P-201ENST00000363216 104 ntBASIC2.31□□□□□ -2.04
MSH6P52701 UBE2FP1-201ENST00000416536 447 ntBASIC2.31□□□□□ -2.04
MSH6P52701 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.31□□□□□ -2.04
MSH6P52701 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.31□□□□□ -2.04
MSH6P52701 DDX3P2-201ENST00000446138 111 ntBASIC2.31□□□□□ -2.04
MSH6P52701 TPT1P14-201ENST00000448018 505 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH6P52701 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.31□□□□□ -2.04
MSH6P52701 RNU5A-4P-201ENST00000516588 111 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH6P52701 AC090888.1-201ENST00000561335 1141 ntBASIC2.31□□□□□ -2.04
MSH6P52701 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
MSH6P52701 AL357094.1-201ENST00000603845 844 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AC072039.2-201ENST00000608883 439 ntBASIC2.31□□□□□ -2.04
MSH6P52701 FTX_3.1-201ENST00000610451 147 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AL139418.1-201ENST00000613613 177 ntBASIC2.31□□□□□ -2.04
MSH6P52701 SDR42E1P2-201ENST00000614861 481 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AC012150.2-201ENST00000621300 544 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AC073308.1-201ENST00000623696 305 ntBASIC2.31□□□□□ -2.04
MSH6P52701 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MSH6P52701 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
MSH6P52701 AC006026.1-201ENST00000444025 1803 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
MSH6P52701 RNU6-931P-201ENST00000363850 107 ntBASIC2.3□□□□□ -2.04
MSH6P52701 MIR513B-201ENST00000385136 84 ntBASIC2.3□□□□□ -2.04
MSH6P52701 RNU2-33P-201ENST00000410344 192 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AL359704.1-201ENST00000411586 781 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MSH6P52701 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.3□□□□□ -2.04
MSH6P52701 MTCO3P45-201ENST00000443036 613 ntBASIC2.3□□□□□ -2.04
MSH6P52701 MTCYBP3-201ENST00000445588 1137 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.3□□□□□ -2.04
MSH6P52701 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.3□□□□□ -2.04
MSH6P52701 AC138853.1-201ENST00000503549 823 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AC091951.3-201ENST00000504093 246 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.3□□□□□ -2.04
MSH6P52701 TPT1P8-201ENST00000510120 555 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.3□□□□□ -2.04
MSH6P52701 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.3□□□□□ -2.04
MSH6P52701 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.3□□□□□ -2.04
MSH6P52701 AL161670.1-201ENST00000554348 137 ntBASIC2.3□□□□□ -2.04
MSH6P52701 PSMA3P-201ENST00000555485 635 ntBASIC2.3□□□□□ -2.04
MSH6P52701 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MSH6P52701 AL450336.1-201ENST00000605180 586 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AC092106.3-201ENST00000611308 722 ntBASIC2.3□□□□□ -2.04
MSH6P52701 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
MSH6P52701 AL157834.3-201ENST00000615543 103 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AC022960.3-201ENST00000619794 441 ntBASIC2.3□□□□□ -2.04
MSH6P52701 AP003399.1-201ENST00000637534 361 ntBASIC2.3□□□□□ -2.04
MSH6P52701 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH6P52701 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
MSH6P52701 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.29□□□□□ -2.04
MSH6P52701 RNU1-105P-201ENST00000363470 161 ntBASIC2.29□□□□□ -2.04
MSH6P52701 SNORD114-26-201ENST00000363543 72 ntBASIC2.29□□□□□ -2.04
MSH6P52701 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
MSH6P52701 SNORD114-22-201ENST00000365423 72 ntBASIC2.29□□□□□ -2.04
MSH6P52701 RNU6-140P-201ENST00000384566 108 ntBASIC2.29□□□□□ -2.04
MSH6P52701 RNA5SP354-201ENST00000391247 136 ntBASIC2.29□□□□□ -2.04
MSH6P52701 USP9YP26-201ENST00000421008 661 ntBASIC2.29□□□□□ -2.04
MSH6P52701 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.29□□□□□ -2.04
MSH6P52701 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.29□□□□□ -2.04
MSH6P52701 AL451074.3-201ENST00000437709 472 ntBASIC2.29□□□□□ -2.04
MSH6P52701 AC244505.5-201ENST00000443639 207 ntBASIC2.29□□□□□ -2.04
MSH6P52701 RPS4XP11-201ENST00000446897 772 ntBASIC2.29□□□□□ -2.04
MSH6P52701 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH6P52701 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.29□□□□□ -2.04
MSH6P52701 RNU6-311P-201ENST00000516224 102 ntBASIC2.29□□□□□ -2.04
MSH6P52701 RNA5SP291-201ENST00000517222 105 ntBASIC2.29□□□□□ -2.04
MSH6P52701 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH6P52701 MTND2P32-201ENST00000521584 1038 ntBASIC2.29□□□□□ -2.04
MSH6P52701 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
MSH6P52701 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH6P52701 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.29□□□□□ -2.04
MSH6P52701 AL133153.1-201ENST00000557756 303 ntBASIC2.29□□□□□ -2.04
MSH6P52701 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.29□□□□□ -2.04
MSH6P52701 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
MSH6P52701 AF038458.1-201ENST00000588406 262 ntBASIC2.29□□□□□ -2.04
MSH6P52701 BCRP9-201ENST00000605312 388 ntBASIC2.29□□□□□ -2.04
MSH6P52701 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
MSH6P52701 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH6P52701 MIR3199-2-201ENST00000636243 86 ntBASIC2.29□□□□□ -2.04
MSH6P52701 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
MSH6P52701 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
MSH6P52701 ZNF876P-202ENST00000398732 1485 ntBASIC2.28□□□□□ -2.04
MSH6P52701 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MSH6P52701 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.28□□□□□ -2.04
MSH6P52701 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MSH6P52701 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms