Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.52□□□□□ -1.85
NEK3P51956 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NEK3P51956 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
NEK3P51956 RNU4-12P-201ENST00000365233 139 ntBASIC3.52□□□□□ -1.85
NEK3P51956 Y_RNA.554-201ENST00000384672 102 ntBASIC3.52□□□□□ -1.85
NEK3P51956 RNU6-780P-201ENST00000391030 104 ntBASIC3.52□□□□□ -1.85
NEK3P51956 U3.37-201ENST00000408528 213 ntBASIC3.52□□□□□ -1.85
NEK3P51956 MIR1289-1-201ENST00000408836 144 ntBASIC3.52□□□□□ -1.85
NEK3P51956 AL161651.1-201ENST00000440882 223 ntBASIC3.52□□□□□ -1.85
NEK3P51956 OSTCP8-201ENST00000445117 448 ntBASIC3.52□□□□□ -1.85
NEK3P51956 PRPS1P1-201ENST00000445305 876 ntBASIC3.52□□□□□ -1.85
NEK3P51956 RNU7-167P-201ENST00000459160 62 ntBASIC3.52□□□□□ -1.85
NEK3P51956 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
NEK3P51956 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
NEK3P51956 MTCO3P9-201ENST00000506989 781 ntBASIC3.52□□□□□ -1.85
NEK3P51956 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK3P51956 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
NEK3P51956 Y_RNA.704-201ENST00000516851 102 ntBASIC3.52□□□□□ -1.85
NEK3P51956 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK3P51956 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.52□□□□□ -1.85
NEK3P51956 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.52□□□□□ -1.85
NEK3P51956 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK3P51956 AC012119.1-201ENST00000603184 222 ntBASIC3.52□□□□□ -1.85
NEK3P51956 AL035413.2-201ENST00000604801 525 ntBASIC3.52□□□□□ -1.85
NEK3P51956 AC007179.3-201ENST00000604976 235 ntBASIC3.52□□□□□ -1.85
NEK3P51956 UCA1.1-201ENST00000620952 75 ntBASIC3.52□□□□□ -1.85
NEK3P51956 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEK3P51956 MFSD8-233ENST00000641482 4860 ntBASIC3.52□□□□□ -1.85
NEK3P51956 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEK3P51956 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEK3P51956 SNORD3E-201ENST00000362899 217 ntBASIC3.51□□□□□ -1.85
NEK3P51956 RNY3P3-201ENST00000363816 102 ntBASIC3.51□□□□□ -1.85
NEK3P51956 RNA5SP387-201ENST00000364226 106 ntBASIC3.51□□□□□ -1.85
NEK3P51956 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
NEK3P51956 MIR10A-201ENST00000385043 110 ntBASIC3.51□□□□□ -1.85
NEK3P51956 SNORA16.2-201ENST00000390991 127 ntBASIC3.51□□□□□ -1.85
NEK3P51956 RNU2-49P-201ENST00000410666 184 ntBASIC3.51□□□□□ -1.85
NEK3P51956 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.51□□□□□ -1.85
NEK3P51956 RPL7P10-201ENST00000417407 739 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AL353678.1-201ENST00000422735 741 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.51□□□□□ -1.85
NEK3P51956 AC009414.1-201ENST00000427200 443 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AC097713.2-201ENST00000430199 356 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.51□□□□□ -1.85
NEK3P51956 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.51□□□□□ -1.85
NEK3P51956 AC125238.1-201ENST00000448842 249 ntBASIC3.51□□□□□ -1.85
NEK3P51956 RPL21P10-201ENST00000463521 490 ntBASIC3.51□□□□□ -1.85
NEK3P51956 SEM1P1-201ENST00000506694 209 ntBASIC3.51□□□□□ -1.85
NEK3P51956 MTND3P25-201ENST00000509243 135 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AC011352.1-201ENST00000512300 793 ntBASIC3.51□□□□□ -1.85
NEK3P51956 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.51□□□□□ -1.85
NEK3P51956 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.51□□□□□ -1.85
NEK3P51956 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.51□□□□□ -1.85
NEK3P51956 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.51□□□□□ -1.85
NEK3P51956 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.51□□□□□ -1.85
NEK3P51956 AL121821.2-201ENST00000556081 394 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.51□□□□□ -1.85
NEK3P51956 AL391813.1-201ENST00000603098 260 ntBASIC3.51□□□□□ -1.85
NEK3P51956 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.51□□□□□ -1.85
NEK3P51956 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.51□□□□□ -1.85
NEK3P51956 AC092794.1-201ENST00000612734 582 ntBASIC3.51□□□□□ -1.85
NEK3P51956 AL031601.2-202ENST00000622650 282 ntBASIC3.51□□□□□ -1.85
NEK3P51956 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NEK3P51956 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEK3P51956 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NEK3P51956 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNU6-384P-201ENST00000364900 104 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNU6-1280P-201ENST00000365211 107 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNVU1-14-201ENST00000384770 164 ntBASIC3.5□□□□□ -1.85
NEK3P51956 SNORD17-201ENST00000390930 237 ntBASIC3.5□□□□□ -1.85
NEK3P51956 AL512633.1-201ENST00000399931 655 ntBASIC3.5□□□□□ -1.85
NEK3P51956 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEK3P51956 RNU2-3P-201ENST00000410144 191 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNA5SP293-201ENST00000410527 113 ntBASIC3.5□□□□□ -1.85
NEK3P51956 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.5□□□□□ -1.85
NEK3P51956 AC005019.1-201ENST00000436455 431 ntBASIC3.5□□□□□ -1.85
NEK3P51956 FAM92A1P2-202ENST00000504766 877 ntBASIC3.5□□□□□ -1.85
NEK3P51956 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NEK3P51956 PHBP14-201ENST00000512887 367 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNU1-86P-201ENST00000516108 154 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.5□□□□□ -1.85
NEK3P51956 RNU1-107P-201ENST00000516617 154 ntBASIC3.5□□□□□ -1.85
NEK3P51956 SNORA70.19-201ENST00000516717 90 ntBASIC3.5□□□□□ -1.85
NEK3P51956 AP004607.1-201ENST00000524456 203 ntBASIC3.5□□□□□ -1.85
NEK3P51956 BNIP3P6-201ENST00000549284 499 ntBASIC3.5□□□□□ -1.85
NEK3P51956 AC011611.1-201ENST00000552179 197 ntBASIC3.5□□□□□ -1.85
NEK3P51956 AC008739.2-201ENST00000597006 317 ntBASIC3.5□□□□□ -1.85
NEK3P51956 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.5□□□□□ -1.85
NEK3P51956 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NEK3P51956 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.5□□□□□ -1.85
NEK3P51956 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.5□□□□□ -1.85
NEK3P51956 AP003400.5-201ENST00000624827 617 ntBASIC3.5□□□□□ -1.85
NEK3P51956 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NEK3P51956 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.5□□□□□ -1.85
NEK3P51956 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.5□□□□□ -1.85
NEK3P51956 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NEK3P51956 MTND5P1-201ENST00000445440 1375 ntBASIC3.5□□□□□ -1.85
NEK3P51956 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms