Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP11P51784 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP11P51784 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP11P51784 SNORA60-201ENST00000362396 134 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNU6-545P-201ENST00000362681 104 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNU6-1159P-201ENST00000362933 107 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNU6-595P-201ENST00000363944 107 ntBASIC4.67□□□□□ -1.66
USP11P51784 Y_RNA.291-201ENST00000364886 113 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNU6-1279P-201ENST00000383917 103 ntBASIC4.67□□□□□ -1.66
USP11P51784 SNORA70E-201ENST00000384492 135 ntBASIC4.67□□□□□ -1.66
USP11P51784 SNORA37-201ENST00000384504 129 ntBASIC4.67□□□□□ -1.66
USP11P51784 MIR153-1-201ENST00000384914 90 ntBASIC4.67□□□□□ -1.66
USP11P51784 MIR93-201ENST00000385024 80 ntBASIC4.67□□□□□ -1.66
USP11P51784 MIR628-201ENST00000385229 95 ntBASIC4.67□□□□□ -1.66
USP11P51784 SNORD115-46-201ENST00000390982 71 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNA5SP317-201ENST00000410176 116 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNA5SP311-201ENST00000411290 116 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC063979.1-201ENST00000415539 377 ntBASIC4.67□□□□□ -1.66
USP11P51784 RPS27AP12-201ENST00000429552 465 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC092573.2-201ENST00000434546 243 ntBASIC4.67□□□□□ -1.66
USP11P51784 AL138752.1-201ENST00000452964 351 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC006517.1-201ENST00000480485 328 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC010469.2-201ENST00000496412 480 ntBASIC4.67□□□□□ -1.66
USP11P51784 SUMO2P6-201ENST00000505273 288 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNA5SP315-201ENST00000516340 116 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNU6-1212P-201ENST00000517023 104 ntBASIC4.67□□□□□ -1.66
USP11P51784 RNA5SP312-201ENST00000517068 116 ntBASIC4.67□□□□□ -1.66
USP11P51784 SNORA31.22-201ENST00000517204 135 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC126177.3-201ENST00000551839 688 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.67□□□□□ -1.66
USP11P51784 MIR548AC-201ENST00000585049 88 ntBASIC4.67□□□□□ -1.66
USP11P51784 AC025946.2-201ENST00000603398 234 ntBASIC4.67□□□□□ -1.66
USP11P51784 MIR6867-201ENST00000610636 67 ntBASIC4.67□□□□□ -1.66
USP11P51784 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP11P51784 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
USP11P51784 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
USP11P51784 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP11P51784 ZNF299P-201ENST00000406845 1804 ntBASIC4.67□□□□□ -1.66
USP11P51784 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP11P51784 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
USP11P51784 PRO1804-201ENST00000623780 2050 ntBASIC4.66□□□□□ -1.66
USP11P51784 AC008725.1-201ENST00000605123 2263 ntBASIC4.66□□□□□ -1.66
USP11P51784 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.66□□□□□ -1.66
USP11P51784 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
USP11P51784 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP11P51784 Y_RNA.16-201ENST00000362421 102 ntBASIC4.66□□□□□ -1.66
USP11P51784 Y_RNA.54-201ENST00000362766 105 ntBASIC4.66□□□□□ -1.66
USP11P51784 RNU6-1317P-201ENST00000364582 104 ntBASIC4.66□□□□□ -1.66
USP11P51784 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.66□□□□□ -1.66
USP11P51784 AC096920.1-201ENST00000423991 241 ntBASIC4.66□□□□□ -1.66
USP11P51784 AL358472.1-201ENST00000431295 329 ntBASIC4.66□□□□□ -1.66
USP11P51784 ELOCP18-201ENST00000434209 337 ntBASIC4.66□□□□□ -1.66
USP11P51784 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.66□□□□□ -1.66
USP11P51784 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.66□□□□□ -1.66
USP11P51784 AC074250.1-201ENST00000511117 192 ntBASIC4.66□□□□□ -1.66
USP11P51784 AC067942.3-201ENST00000512025 362 ntBASIC4.66□□□□□ -1.66
USP11P51784 SNORA31.6-201ENST00000516241 130 ntBASIC4.66□□□□□ -1.66
USP11P51784 RNU7-143P-201ENST00000516781 65 ntBASIC4.66□□□□□ -1.66
USP11P51784 AC074050.1-201ENST00000563247 211 ntBASIC4.66□□□□□ -1.66
USP11P51784 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.66□□□□□ -1.66
USP11P51784 AC007224.1-201ENST00000564410 144 ntBASIC4.66□□□□□ -1.66
USP11P51784 AC136932.1-201ENST00000574771 208 ntBASIC4.66□□□□□ -1.66
USP11P51784 MIR4643-201ENST00000577473 78 ntBASIC4.66□□□□□ -1.66
USP11P51784 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.66□□□□□ -1.66
USP11P51784 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP11P51784 AC010620.2-201ENST00000600135 313 ntBASIC4.66□□□□□ -1.66
USP11P51784 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.66□□□□□ -1.66
USP11P51784 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.66□□□□□ -1.66
USP11P51784 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.66□□□□□ -1.66
USP11P51784 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.66□□□□□ -1.66
USP11P51784 AC011266.1-201ENST00000624119 3569 ntBASIC4.65□□□□□ -1.66
USP11P51784 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP11P51784 Z75746.1-201ENST00000440243 2080 ntBASIC4.65□□□□□ -1.66
USP11P51784 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.65□□□□□ -1.66
USP11P51784 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.65□□□□□ -1.66
USP11P51784 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
USP11P51784 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
USP11P51784 MIR448-201ENST00000362131 111 ntBASIC4.65□□□□□ -1.67
USP11P51784 Y_RNA.200-201ENST00000364018 102 ntBASIC4.65□□□□□ -1.67
USP11P51784 RNA5SP130-201ENST00000364431 114 ntBASIC4.65□□□□□ -1.67
USP11P51784 Y_RNA.506-201ENST00000384494 102 ntBASIC4.65□□□□□ -1.67
USP11P51784 MIR513A2-201ENST00000385249 127 ntBASIC4.65□□□□□ -1.67
USP11P51784 RNU6-493P-201ENST00000391321 108 ntBASIC4.65□□□□□ -1.67
USP11P51784 RNA5SP494-201ENST00000410653 129 ntBASIC4.65□□□□□ -1.67
USP11P51784 RNU4-78P-201ENST00000410940 126 ntBASIC4.65□□□□□ -1.67
USP11P51784 AC007098.1-201ENST00000420122 367 ntBASIC4.65□□□□□ -1.67
USP11P51784 CKS1BP5-201ENST00000434172 273 ntBASIC4.65□□□□□ -1.67
USP11P51784 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.65□□□□□ -1.67
USP11P51784 RPL23AP22-201ENST00000437556 453 ntBASIC4.65□□□□□ -1.67
USP11P51784 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP11P51784 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.65□□□□□ -1.67
USP11P51784 Y_RNA.703-201ENST00000516846 111 ntBASIC4.65□□□□□ -1.67
USP11P51784 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.65□□□□□ -1.67
USP11P51784 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.65□□□□□ -1.67
USP11P51784 AC004024.1-201ENST00000549244 247 ntBASIC4.65□□□□□ -1.67
USP11P51784 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.65□□□□□ -1.67
USP11P51784 MIR3160-1-201ENST00000577972 85 ntBASIC4.65□□□□□ -1.67
USP11P51784 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms