Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.72□□□□□ -1.97
NEDD4P46934 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.72□□□□□ -1.97
NEDD4P46934 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.72□□□□□ -1.97
NEDD4P46934 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.72□□□□□ -1.97
NEDD4P46934 AMZ2P1-203ENST00000565833 850 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC025281.1-201ENST00000567026 265 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 MTCO3P24-201ENST00000572729 782 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 MIR5007-201ENST00000583098 95 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC073648.5-201ENST00000603502 305 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 DPPA3P3-201ENST00000603842 430 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD4P46934 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD4P46934 ZNF271P-202ENST00000465539 1970 ntBASIC2.71□□□□□ -1.97
NEDD4P46934 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NEDD4P46934 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NEDD4P46934 RNU6-1167P-201ENST00000363227 94 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 RNU6-39P-201ENST00000384344 107 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 RNU6-1035P-201ENST00000384477 107 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AL354719.1-201ENST00000406535 843 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 BTF3P7-201ENST00000407097 488 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 RNA5SP38-201ENST00000410750 119 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 RNU4-53P-201ENST00000410828 140 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.71□□□□□ -1.98
NEDD4P46934 MTCO3P41-201ENST00000414801 328 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NEDD4P46934 AC104651.1-201ENST00000427559 735 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NEDD4P46934 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.71□□□□□ -1.98
NEDD4P46934 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.71□□□□□ -1.98
NEDD4P46934 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD4P46934 TPT1P7-201ENST00000458300 517 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AC007182.2-201ENST00000489251 402 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD4P46934 AC090572.1-201ENST00000519251 160 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AP003392.2-201ENST00000527269 208 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD4P46934 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD4P46934 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD4P46934 MIR3945-201ENST00000581853 98 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD4P46934 AC007363.1-201ENST00000604736 620 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AC107294.1-201ENST00000609524 467 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 Z99129.1-201ENST00000612510 255 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 AL589994.2-201ENST00000621124 579 ntBASIC2.71□□□□□ -1.98
NEDD4P46934 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NEDD4P46934 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD4P46934 RNU6-108P-201ENST00000365558 107 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD4P46934 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 RNU6-14P-201ENST00000384630 106 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 MIR325-201ENST00000385260 98 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 RNU2-39P-201ENST00000410604 198 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 RN7SKP284-201ENST00000411002 343 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 GPR143P-201ENST00000434155 205 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 FTH1P25-201ENST00000447665 469 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC079448.1-201ENST00000449377 373 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.7□□□□□ -1.98
NEDD4P46934 HMGN2P13-201ENST00000476476 274 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AL135752.1-201ENST00000479477 471 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 AC117522.1-201ENST00000509821 380 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC008549.1-201ENST00000512900 643 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC010493.1-201ENST00000513479 292 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 SCARNA24.1-201ENST00000516465 137 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 RNU6-410P-201ENST00000517006 107 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.7□□□□□ -1.98
NEDD4P46934 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 AC010546.1-201ENST00000569391 485 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 AC098848.2-201ENST00000588023 330 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC091805.2-201ENST00000603848 235 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC103591.3-201ENST00000608684 209 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 AC013412.1-201ENST00000610687 192 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 MIR6766-201ENST00000622641 72 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.7□□□□□ -1.98
NEDD4P46934 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD4P46934 MTND5P29-201ENST00000458676 1807 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD4P46934 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
NEDD4P46934 Y_RNA.245-201ENST00000364493 95 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 SMIM11P1-201ENST00000369586 178 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 RNU6-217P-201ENST00000384164 104 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 RNU1-101P-201ENST00000391171 127 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 AL139397.2-201ENST00000404529 772 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 SNORA3.2-201ENST00000408221 125 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 AL096701.2-201ENST00000416920 238 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.69□□□□□ -1.98
NEDD4P46934 BTF3L4P3-201ENST00000418879 476 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD4P46934 ELOCP14-201ENST00000428070 331 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 ELOCP7-201ENST00000439968 331 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.69□□□□□ -1.98
NEDD4P46934 AC132479.1-201ENST00000449160 144 ntBASIC2.69□□□□□ -1.98
NEDD4P46934 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms