Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP13P45452 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
MMP13P45452 Y_RNA.145-201ENST00000363527 102 ntBASIC3.46□□□□□ -1.86
MMP13P45452 RNA5SP50-201ENST00000363731 107 ntBASIC3.46□□□□□ -1.86
MMP13P45452 RNU6-1188P-201ENST00000363795 107 ntBASIC3.46□□□□□ -1.86
MMP13P45452 RNU6-960P-201ENST00000364056 120 ntBASIC3.46□□□□□ -1.86
MMP13P45452 Y_RNA.202-201ENST00000364083 110 ntBASIC3.46□□□□□ -1.86
MMP13P45452 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
MMP13P45452 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
MMP13P45452 RNU6-754P-201ENST00000391166 107 ntBASIC3.46□□□□□ -1.86
MMP13P45452 MTCYBP4-201ENST00000401524 249 ntBASIC3.46□□□□□ -1.86
MMP13P45452 AP000567.1-201ENST00000406413 156 ntBASIC3.46□□□□□ -1.86
MMP13P45452 Y_RNA.605-201ENST00000410577 105 ntBASIC3.46□□□□□ -1.86
MMP13P45452 RN7SKP27-201ENST00000410684 333 ntBASIC3.46□□□□□ -1.86
MMP13P45452 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
MMP13P45452 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.46□□□□□ -1.86
MMP13P45452 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.46□□□□□ -1.86
MMP13P45452 CALM2P2-201ENST00000428512 440 ntBASIC3.46□□□□□ -1.86
MMP13P45452 FABP5P14-201ENST00000437273 393 ntBASIC3.46□□□□□ -1.86
MMP13P45452 PTP4A1P4-201ENST00000512479 322 ntBASIC3.46□□□□□ -1.86
MMP13P45452 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.46□□□□□ -1.86
MMP13P45452 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.46□□□□□ -1.86
MMP13P45452 AP000763.2-201ENST00000540641 163 ntBASIC3.46□□□□□ -1.86
MMP13P45452 AC007458.1-201ENST00000542812 373 ntBASIC3.46□□□□□ -1.86
MMP13P45452 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP13P45452 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP13P45452 MIR4790-201ENST00000577799 79 ntBASIC3.46□□□□□ -1.86
MMP13P45452 AC106900.2-201ENST00000604994 317 ntBASIC3.46□□□□□ -1.86
MMP13P45452 AP000654.2-201ENST00000605633 586 ntBASIC3.46□□□□□ -1.86
MMP13P45452 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP13P45452 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
MMP13P45452 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP13P45452 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
MMP13P45452 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP13P45452 AL672296.1-201ENST00000427780 2158 ntBASIC3.45□□□□□ -1.86
MMP13P45452 Y_RNA.212-201ENST00000364177 102 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RNU6-946P-201ENST00000383878 107 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RNU6-637P-201ENST00000384050 107 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RNU6-432P-201ENST00000384196 109 ntBASIC3.45□□□□□ -1.86
MMP13P45452 Y_RNA.459-201ENST00000384251 102 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RNU6-1105P-201ENST00000384774 107 ntBASIC3.45□□□□□ -1.86
MMP13P45452 MIR568-201ENST00000385036 95 ntBASIC3.45□□□□□ -1.86
MMP13P45452 SNORA48.7-201ENST00000391302 135 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AL356057.3-201ENST00000402607 340 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AC074085.1-201ENST00000413598 418 ntBASIC3.45□□□□□ -1.86
MMP13P45452 UBE2FP1-201ENST00000416536 447 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AL358176.2-201ENST00000425769 204 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.45□□□□□ -1.86
MMP13P45452 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP13P45452 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.45□□□□□ -1.86
MMP13P45452 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.45□□□□□ -1.86
MMP13P45452 MTND1P17-201ENST00000448961 204 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AC107399.1-201ENST00000451226 265 ntBASIC3.45□□□□□ -1.86
MMP13P45452 SCARNA18-201ENST00000459004 134 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RN7SL293P-201ENST00000481765 281 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RPL21P129-201ENST00000491732 478 ntBASIC3.45□□□□□ -1.86
MMP13P45452 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MMP13P45452 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.45□□□□□ -1.86
MMP13P45452 AC022634.1-201ENST00000520765 532 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.45□□□□□ -1.86
MMP13P45452 CR383656.7-201ENST00000548164 174 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AL121603.1-201ENST00000553815 142 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AL355836.1-201ENST00000555951 870 ntBASIC3.45□□□□□ -1.86
MMP13P45452 MIR4429-201ENST00000580105 73 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AC007938.3-201ENST00000604965 623 ntBASIC3.45□□□□□ -1.86
MMP13P45452 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.45□□□□□ -1.86
MMP13P45452 AL355365.1-201ENST00000616480 294 ntBASIC3.45□□□□□ -1.86
MMP13P45452 U6.114-201ENST00000636407 96 ntBASIC3.45□□□□□ -1.86
MMP13P45452 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.45□□□□□ -1.86
MMP13P45452 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MMP13P45452 AL356274.2-201ENST00000624379 3752 ntBASIC3.45□□□□□ -1.86
MMP13P45452 TPTE2P4-201ENST00000258589 1605 ntBASIC3.44□□□□□ -1.86
MMP13P45452 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
MMP13P45452 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MMP13P45452 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
MMP13P45452 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.44□□□□□ -1.86
MMP13P45452 RNA5SP119-201ENST00000362715 117 ntBASIC3.44□□□□□ -1.86
MMP13P45452 RNU6-1287P-201ENST00000362914 107 ntBASIC3.44□□□□□ -1.86
MMP13P45452 Y_RNA.148-201ENST00000363557 117 ntBASIC3.44□□□□□ -1.86
MMP13P45452 Y_RNA.187-201ENST00000363918 113 ntBASIC3.44□□□□□ -1.86
MMP13P45452 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.44□□□□□ -1.86
MMP13P45452 RNU6-1060P-201ENST00000384664 107 ntBASIC3.44□□□□□ -1.86
MMP13P45452 MIR135A2-201ENST00000384854 100 ntBASIC3.44□□□□□ -1.86
MMP13P45452 MIR490-201ENST00000384865 128 ntBASIC3.44□□□□□ -1.86
MMP13P45452 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
MMP13P45452 SNORA16.2-201ENST00000390991 127 ntBASIC3.44□□□□□ -1.86
MMP13P45452 RPL21P3-201ENST00000395517 478 ntBASIC3.44□□□□□ -1.86
MMP13P45452 AL109755.1-201ENST00000401791 649 ntBASIC3.44□□□□□ -1.86
MMP13P45452 RPL37P10-201ENST00000412884 288 ntBASIC3.44□□□□□ -1.86
MMP13P45452 RPL21P24-201ENST00000413752 448 ntBASIC3.44□□□□□ -1.86
MMP13P45452 BX682237.1-201ENST00000415016 335 ntBASIC3.44□□□□□ -1.86
MMP13P45452 IPO7P1-201ENST00000442031 636 ntBASIC3.44□□□□□ -1.86
MMP13P45452 CYCSP35-201ENST00000451978 304 ntBASIC3.44□□□□□ -1.86
MMP13P45452 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.44□□□□□ -1.86
MMP13P45452 snoU109.4-201ENST00000458953 143 ntBASIC3.44□□□□□ -1.86
MMP13P45452 AC146507.2-201ENST00000460608 476 ntBASIC3.44□□□□□ -1.86
MMP13P45452 DYNLL1P5-201ENST00000467158 270 ntBASIC3.44□□□□□ -1.86
MMP13P45452 AC087884.1-201ENST00000469738 328 ntBASIC3.44□□□□□ -1.86
MMP13P45452 AC010631.1-201ENST00000474150 156 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms