Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CBX3P7-201ENST00000532876 502 ntBASIC2□□□□□ -2.09
TNFSF9P41273 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TNFSF9P41273 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2□□□□□ -2.09
TNFSF9P41273 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2□□□□□ -2.09
TNFSF9P41273 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2□□□□□ -2.09
TNFSF9P41273 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2□□□□□ -2.09
TNFSF9P41273 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2□□□□□ -2.09
TNFSF9P41273 uc_338.14-201ENST00000613162 166 ntBASIC2□□□□□ -2.09
TNFSF9P41273 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2□□□□□ -2.09
TNFSF9P41273 AC012150.2-201ENST00000621300 544 ntBASIC2□□□□□ -2.09
TNFSF9P41273 U6.99-201ENST00000637524 83 ntBASIC2□□□□□ -2.09
TNFSF9P41273 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TNFSF9P41273 AL359854.1-201ENST00000614203 1594 ntBASIC2□□□□□ -2.09
TNFSF9P41273 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
TNFSF9P41273 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF9P41273 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF9P41273 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF9P41273 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.99□□□□□ -2.09
TNFSF9P41273 NACAP2-201ENST00000318548 624 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 RNU1-17P-201ENST00000363022 152 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 RNU6-433P-201ENST00000363216 104 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 SNORA4.1-201ENST00000364263 144 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AL008987.1-201ENST00000415528 237 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF9P41273 PTGES3P4-201ENST00000426243 356 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 ISCA1P1-201ENST00000426679 387 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.99□□□□□ -2.09
TNFSF9P41273 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.99□□□□□ -2.09
TNFSF9P41273 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF9P41273 USP9YP24-201ENST00000434374 697 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF9P41273 USP9YP17-201ENST00000444617 696 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 RPL7P12-201ENST00000446719 750 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AL606517.1-201ENST00000446914 387 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC080013.2-201ENST00000460866 323 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC068781.1-201ENST00000488231 618 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 RPF2P2-201ENST00000504693 896 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 SNORA25.11-201ENST00000515935 105 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 RNU6-581P-201ENST00000516214 105 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF9P41273 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.99□□□□□ -2.09
TNFSF9P41273 AP000907.2-201ENST00000530827 353 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF9P41273 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.99□□□□□ -2.09
TNFSF9P41273 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF9P41273 ROCK1P1-201ENST00000573767 549 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 ISCA1P3-201ENST00000577104 373 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.99□□□□□ -2.09
TNFSF9P41273 AL158042.1-201ENST00000605338 460 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC097468.3-201ENST00000607956 456 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.99□□□□□ -2.09
TNFSF9P41273 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF9P41273 AL356596.1-201ENST00000624230 379 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF9P41273 ZNF876P-202ENST00000398732 1485 ntBASIC1.99□□□□□ -2.09
TNFSF9P41273 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.99□□□□□ -2.09
TNFSF9P41273 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.98□□□□□ -2.09
TNFSF9P41273 HSPA8P4-201ENST00000511877 1920 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 RNU6-486P-201ENST00000363116 107 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 RNU4-92P-201ENST00000363783 136 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 NDUFS5P1-201ENST00000405668 289 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 U6atac.2-201ENST00000408644 118 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 RNU6-584P-201ENST00000410350 95 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 HMGB3P2-201ENST00000411913 584 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TNFSF9P41273 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.98□□□□□ -2.09
TNFSF9P41273 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFSF9P41273 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.98□□□□□ -2.09
TNFSF9P41273 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFSF9P41273 AC055855.1-201ENST00000489563 579 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 AC079804.2-201ENST00000490376 200 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TNFSF9P41273 TPT1P8-201ENST00000510120 555 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFSF9P41273 RNA5SP112-201ENST00000515937 99 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 RNU6-703P-201ENST00000516946 107 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 SCARNA1-201ENST00000517138 166 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
TNFSF9P41273 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.98□□□□□ -2.09
TNFSF9P41273 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFSF9P41273 AL133241.1-201ENST00000556832 487 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFSF9P41273 BNIP3P23-201ENST00000599655 511 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.98□□□□□ -2.09
TNFSF9P41273 MTCYBP22-201ENST00000603788 447 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 AC112220.3-201ENST00000605502 502 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 AL161423.1-201ENST00000613700 262 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 AC131280.1-202ENST00000624067 4211 ntBASIC1.98□□□□□ -2.09
TNFSF9P41273 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
TNFSF9P41273 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TNFSF9P41273 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TNFSF9P41273 RNU6-723P-201ENST00000383973 107 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 RN7SKP158-201ENST00000410453 326 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 VPS26BP1-201ENST00000417155 755 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 RPS3AP44-201ENST00000425466 790 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 SRIP2-201ENST00000428470 166 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 TXNL1P1-201ENST00000429528 554 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms