Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXC13P31276 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC13P31276 AC107016.2-201ENST00000547968 190 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC13P31276 BNIP3P9-201ENST00000603714 553 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC008277.2-201ENST00000605196 797 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC087045.1-201ENST00000605856 382 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 FTX_3.1-201ENST00000610451 147 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 MIR7844-201ENST00000616161 122 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC093591.3-201ENST00000634516 308 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 IGHVIII-44-202ENST00000636235 289 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 MIR3688-2-201ENST00000636963 87 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXC13P31276 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC13P31276 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HOXC13P31276 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC13P31276 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 AL137003.2-201ENST00000606924 2538 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 Y_RNA.97-201ENST00000363094 102 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RNU6-1284P-201ENST00000363701 100 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RNU4-91P-201ENST00000364778 135 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 SET-203ENST00000372688 801 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC13P31276 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 Y_RNA.453-201ENST00000384223 109 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RNU6-851P-201ENST00000384565 107 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 MIR181A1-201ENST00000385026 110 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RPS20P2-201ENST00000402520 389 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 FGF7P8-201ENST00000402994 292 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AL356057.2-201ENST00000403318 432 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AL359634.1-202ENST00000404721 284 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 HMGN2P35-201ENST00000412164 270 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC13P31276 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC13P31276 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC13P31276 AC093151.1-201ENST00000427711 313 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 GTF2IP20-201ENST00000431663 360 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC13P31276 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC13P31276 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 AC013267.1-201ENST00000458227 267 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AC146507.2-201ENST00000460608 476 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 MRPS17P3-201ENST00000465453 385 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 AC126389.1-201ENST00000477436 290 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC13P31276 MRPS36P2-201ENST00000512569 299 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 SNORA20.3-201ENST00000516880 132 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 RNU6-201P-201ENST00000517100 61 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC13P31276 NACAP3-201ENST00000552100 481 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC13P31276 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC13P31276 AL138976.2-201ENST00000563989 694 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 SEPT7P9-203ENST00000604116 343 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AC136601.2-201ENST00000604356 474 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AL022154.1-201ENST00000604698 785 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 ATP1B3P1-201ENST00000605365 821 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AC091304.9-201ENST00000612091 226 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC13P31276 CASC19-280ENST00000642102 1351 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
HOXC13P31276 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC13P31276 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 CBX3P1-201ENST00000325243 554 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC062016.1-201ENST00000355719 319 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RNU5F-7P-201ENST00000363696 115 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RNU5A-6P-201ENST00000384136 116 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RNU6-809P-201ENST00000384461 107 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 Y_RNA.535-201ENST00000384612 99 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 MT-TL1-201ENST00000386347 75 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RNU6-1009P-201ENST00000390996 107 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AL590002.1-201ENST00000406554 418 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AL513475.1-201ENST00000406602 315 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 MIR1261-201ENST00000408659 82 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RNU2-62P-201ENST00000410868 191 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 AL365184.2-201ENST00000431139 435 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 MTCO3P18-201ENST00000440206 761 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC13P31276 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 DPPA3P1-201ENST00000448050 469 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC13P31276 AL109933.2-201ENST00000452651 260 ntBASIC3.07□□□□□ -1.92
HOXC13P31276 RPL37P6-201ENST00000460682 294 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms