Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC005498.1-201ENST00000592125 465 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC012507.3-201ENST00000603556 477 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HOXC8P31273 AC139792.3-201ENST00000623525 224 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 AC243829.7-201ENST00000633081 225 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC110079.1-202ENST00000635213 138 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 MIR3688-2-201ENST00000636963 87 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC8P31273 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
HOXC8P31273 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC8P31273 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HOXC8P31273 RNU1-35P-201ENST00000362782 153 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 RNU6-805P-201ENST00000365643 106 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 Y_RNA.381-201ENST00000365666 102 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXC8P31273 XGY1-201ENST00000381172 446 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC8P31273 AC068050.1-201ENST00000394891 380 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AL445529.1-201ENST00000398713 389 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC8P31273 CIR1P3-201ENST00000405137 479 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 RNA5SP293-201ENST00000410527 113 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC8P31273 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC8P31273 TIMM9P3-201ENST00000428659 274 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AL513043.1-201ENST00000439124 535 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 MTND4P18-201ENST00000447010 465 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC8P31273 SCARNA24.1-201ENST00000516465 137 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC090572.1-201ENST00000519251 160 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC8P31273 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
HOXC8P31273 AL512360.1-201ENST00000555346 234 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 SNORA59B-202ENST00000578183 701 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 DPPA3P3-201ENST00000603842 430 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC136601.2-201ENST00000604356 474 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AP001596.2-201ENST00000608410 312 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC103710.2-201ENST00000609912 942 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 FTX_3.1-201ENST00000610451 147 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 AC013412.1-201ENST00000610687 192 ntBASIC3.06□□□□□ -1.92
HOXC8P31273 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC8P31273 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXC8P31273 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC8P31273 AC092593.1-201ENST00000515413 1815 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC8P31273 RNU6-1167P-201ENST00000363227 94 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 SNORD56.2-201ENST00000363242 71 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 RNU6-1085P-201ENST00000363576 107 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC8P31273 Y_RNA.453-201ENST00000384223 109 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 RNU6-39P-201ENST00000384344 107 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 RNU2-9P-201ENST00000410194 145 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 RNU6-193P-201ENST00000410977 107 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC8P31273 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 MTATP6P18-201ENST00000417994 673 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 AC137499.1-201ENST00000427602 88 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 GPR143P-201ENST00000434155 205 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 RPS15AP9-201ENST00000439856 381 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 RPL12P25-201ENST00000455592 494 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 RPL26P9-201ENST00000457466 433 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 FAM92A1P2-202ENST00000504766 877 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC8P31273 AC114781.4-201ENST00000513707 639 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC8P31273 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC8P31273 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 RPS3AP4-201ENST00000555161 764 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC8P31273 AP000907.4-201ENST00000604143 237 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 AC090115.4-201ENST00000609970 188 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HOXC8P31273 AC010338.1-201ENST00000621823 717 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC8P31273 MTND5P7-201ENST00000413558 1798 ntBASIC3.05□□□□□ -1.92
HOXC8P31273 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 AC004520.1-201ENST00000608362 1413 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 Y_RNA.402-201ENST00000383972 102 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 RNU6-483P-201ENST00000384088 108 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 MIR512-1-201ENST00000384913 84 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 MIR1-2-201ENST00000384961 85 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC8P31273 MIR888-201ENST00000401186 77 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 NDUFS5P1-201ENST00000405668 289 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 MIR1277-201ENST00000408536 78 ntBASIC3.04□□□□□ -1.92
HOXC8P31273 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC8P31273 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms