Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AF038458.1-201ENST00000588406 262 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC068790.3-201ENST00000602988 553 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AL022161.1-201ENST00000604390 213 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC013562.2-201ENST00000611632 603 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXA9P31269 AC013476.2-201ENST00000614456 459 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC010133.1-201ENST00000615809 842 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AL603755.1-201ENST00000619504 163 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AF246928.1-201ENST00000623768 87 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC097520.1-201ENST00000624435 385 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC007494.3-201ENST00000624660 743 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC097655.1-201ENST00000635075 318 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXA9P31269 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXA9P31269 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXA9P31269 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXA9P31269 Z85995.1-201ENST00000415547 335 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 SPA17P1-201ENST00000416656 452 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 USP9YP13-201ENST00000417797 480 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 Z99497.1-201ENST00000421282 135 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AC099548.1-201ENST00000421443 426 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AL512844.2-201ENST00000433990 593 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXA9P31269 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXA9P31269 AC005094.1-201ENST00000440420 368 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 ELOCP30-201ENST00000447108 299 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 MTND2P24-201ENST00000453434 806 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 RNU7-59P-201ENST00000459101 61 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AC109486.1-201ENST00000486833 374 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 RNA5SP182-201ENST00000516064 82 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 RNU6-201P-201ENST00000517100 61 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 RNU6-64P-201ENST00000517119 105 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AC106038.2-201ENST00000520706 568 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AC124947.2-202ENST00000552735 133 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXA9P31269 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXA9P31269 LRRC37A5P-203ENST00000580181 585 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXA9P31269 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HOXA9P31269 AC004908.2-201ENST00000609090 574 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXA9P31269 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXA9P31269 MIR4275-201ENST00000636486 87 ntBASIC2.18□□□□□ -2.06
HOXA9P31269 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXA9P31269 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HOXA9P31269 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA9P31269 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA9P31269 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA9P31269 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA9P31269 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXA9P31269 RNY4P24-201ENST00000362735 96 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 RNU6-533P-201ENST00000384144 107 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AL139397.2-201ENST00000404529 772 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 RPL21P24-201ENST00000413752 448 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 USP9YP27-201ENST00000418455 438 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 MTND2P18-201ENST00000419962 1030 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AL451054.2-201ENST00000420896 202 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA9P31269 TIMM9P1-201ENST00000436122 256 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA9P31269 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXA9P31269 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC117522.2-201ENST00000510049 657 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 RNU6-840P-201ENST00000517275 65 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AC107934.1-201ENST00000522215 217 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 MTND4LP18-201ENST00000526864 291 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.17□□□□□ -2.06
HOXA9P31269 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA9P31269 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.17□□□□□ -2.06
HOXA9P31269 MIR3118-1-201ENST00000581787 76 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 SNORD14A-201ENST00000606526 91 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA9P31269 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA9P31269 SDR42E1P2-201ENST00000614861 481 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 AC022079.1-201ENST00000621546 602 ntBASIC2.17□□□□□ -2.06
HOXA9P31269 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA9P31269 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA9P31269 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA9P31269 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HOXA9P31269 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
HOXA9P31269 RNA5SP99-201ENST00000364020 114 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXA9P31269 SNORD115.1-201ENST00000391109 76 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXA9P31269 MTND1P23-201ENST00000416931 372 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AL353777.1-201ENST00000425552 326 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms