Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU2-41P-201ENST00000410991 178 ntBASIC2.63□□□□□ -1.99
SHC1P29353 Z92545.1-201ENST00000411782 234 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHC1P29353 RPL7P46-201ENST00000425129 740 ntBASIC2.63□□□□□ -1.99
SHC1P29353 MTCO1P39-201ENST00000426148 480 ntBASIC2.63□□□□□ -1.99
SHC1P29353 RPL21P40-201ENST00000428586 483 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AL139132.1-201ENST00000431587 344 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AC004866.2-201ENST00000438285 481 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.63□□□□□ -1.99
SHC1P29353 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.63□□□□□ -1.99
SHC1P29353 AL118520.1-201ENST00000450770 291 ntBASIC2.63□□□□□ -1.99
SHC1P29353 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.63□□□□□ -1.99
SHC1P29353 AMD1P1-201ENST00000457220 922 ntBASIC2.63□□□□□ -1.99
SHC1P29353 RPS29P15-201ENST00000458329 171 ntBASIC2.63□□□□□ -1.99
SHC1P29353 RPL21P8-201ENST00000465083 535 ntBASIC2.63□□□□□ -1.99
SHC1P29353 GMFBP1-201ENST00000467831 427 ntBASIC2.63□□□□□ -1.99
SHC1P29353 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.63□□□□□ -1.99
SHC1P29353 AC010631.1-201ENST00000474150 156 ntBASIC2.63□□□□□ -1.99
SHC1P29353 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.63□□□□□ -1.99
SHC1P29353 AC105417.1-201ENST00000514691 285 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.63□□□□□ -1.99
SHC1P29353 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.63□□□□□ -1.99
SHC1P29353 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.63□□□□□ -1.99
SHC1P29353 AP001804.3-201ENST00000525146 880 ntBASIC2.63□□□□□ -1.99
SHC1P29353 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHC1P29353 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.63□□□□□ -1.99
SHC1P29353 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
SHC1P29353 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.63□□□□□ -1.99
SHC1P29353 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.63□□□□□ -1.99
SHC1P29353 AL451007.1-201ENST00000595491 289 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AL603758.1-201ENST00000618654 241 ntBASIC2.63□□□□□ -1.99
SHC1P29353 MIR6130-201ENST00000619419 109 ntBASIC2.63□□□□□ -1.99
SHC1P29353 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
SHC1P29353 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SHC1P29353 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.63□□□□□ -1.99
SHC1P29353 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
SHC1P29353 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.63□□□□□ -1.99
SHC1P29353 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHC1P29353 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
SHC1P29353 NACAP2-201ENST00000318548 624 ntBASIC2.62□□□□□ -1.99
SHC1P29353 RNU6-960P-201ENST00000364056 120 ntBASIC2.62□□□□□ -1.99
SHC1P29353 RNU1-140P-201ENST00000365040 165 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SNORA24.1-201ENST00000384401 135 ntBASIC2.62□□□□□ -1.99
SHC1P29353 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHC1P29353 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHC1P29353 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHC1P29353 RNU6-903P-201ENST00000391270 109 ntBASIC2.62□□□□□ -1.99
SHC1P29353 UBE2V1P2-201ENST00000397758 440 ntBASIC2.62□□□□□ -1.99
SHC1P29353 UBA52P6-201ENST00000399822 382 ntBASIC2.62□□□□□ -1.99
SHC1P29353 RNU6-1148P-201ENST00000410992 104 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.62□□□□□ -1.99
SHC1P29353 EEF1A1P41-201ENST00000414667 207 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.62□□□□□ -1.99
SHC1P29353 AL137014.1-201ENST00000420490 1226 ntBASIC2.62□□□□□ -1.99
SHC1P29353 PPP1R11P2-201ENST00000423543 382 ntBASIC2.62□□□□□ -1.99
SHC1P29353 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.62□□□□□ -1.99
SHC1P29353 MTATP6P4-201ENST00000427725 675 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.62□□□□□ -1.99
SHC1P29353 RPL21P2-201ENST00000440049 481 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.62□□□□□ -1.99
SHC1P29353 MTCO3P45-201ENST00000443036 613 ntBASIC2.62□□□□□ -1.99
SHC1P29353 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.62□□□□□ -1.99
SHC1P29353 RNU7-182P-201ENST00000459009 62 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SNORD97-201ENST00000459187 142 ntBASIC2.62□□□□□ -1.99
SHC1P29353 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHC1P29353 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.62□□□□□ -1.99
SHC1P29353 AC010486.1-201ENST00000511793 424 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SNORA31.1-201ENST00000515993 133 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SNORA31.5-201ENST00000516190 133 ntBASIC2.62□□□□□ -1.99
SHC1P29353 RNU6-1092P-201ENST00000516955 87 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SNORA31.22-201ENST00000517204 135 ntBASIC2.62□□□□□ -1.99
SHC1P29353 SNORA31.26-201ENST00000517250 137 ntBASIC2.62□□□□□ -1.99
SHC1P29353 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.62□□□□□ -1.99
SHC1P29353 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.62□□□□□ -1.99
SHC1P29353 AC100870.1-201ENST00000522035 505 ntBASIC2.62□□□□□ -1.99
SHC1P29353 OR5AL2P-201ENST00000532185 920 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC023050.3-201ENST00000541142 333 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.62□□□□□ -1.99
SHC1P29353 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.62□□□□□ -1.99
SHC1P29353 AC018638.8-201ENST00000588755 281 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC023043.3-201ENST00000593113 385 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
SHC1P29353 AL133393.1-201ENST00000603277 287 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC012443.1-201ENST00000605605 231 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC009570.1-201ENST00000609599 745 ntBASIC2.62□□□□□ -1.99
SHC1P29353 AC011155.2-201ENST00000623202 216 ntBASIC2.62□□□□□ -1.99
SHC1P29353 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHC1P29353 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHC1P29353 AC103988.1-201ENST00000566382 2177 ntBASIC2.61□□□□□ -1.99
SHC1P29353 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHC1P29353 CUL1P1-201ENST00000509510 2425 ntBASIC2.61□□□□□ -1.99
SHC1P29353 MTND5P17-201ENST00000418405 1603 ntBASIC2.61□□□□□ -1.99
SHC1P29353 AP003122.5-201ENST00000527668 3766 ntBASIC2.61□□□□□ -1.99
SHC1P29353 AC073343.1-201ENST00000328239 651 ntBASIC2.61□□□□□ -1.99
SHC1P29353 RNU1-35P-201ENST00000362782 153 ntBASIC2.61□□□□□ -1.99
SHC1P29353 Y_RNA.61-201ENST00000362835 102 ntBASIC2.61□□□□□ -1.99
SHC1P29353 RNU6-1284P-201ENST00000363701 100 ntBASIC2.61□□□□□ -1.99
SHC1P29353 SNORA23-201ENST00000365128 182 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms