Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.99□□□□□ -1.93
BDNFP23560 AC118465.1-201ENST00000513820 1271 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AC119751.5-201ENST00000514077 770 ntBASIC2.99□□□□□ -1.93
BDNFP23560 RNU6-123P-201ENST00000516163 102 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.99□□□□□ -1.93
BDNFP23560 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.99□□□□□ -1.93
BDNFP23560 AC079600.2-201ENST00000550076 130 ntBASIC2.99□□□□□ -1.93
BDNFP23560 MIR5692A1-201ENST00000580523 69 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AL138963.2-201ENST00000605137 226 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AC008121.3-201ENST00000618726 433 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AC019226.2-201ENST00000625973 424 ntBASIC2.99□□□□□ -1.93
BDNFP23560 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.99□□□□□ -1.93
BDNFP23560 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.99□□□□□ -1.93
BDNFP23560 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.99□□□□□ -1.93
BDNFP23560 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BDNFP23560 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.98□□□□□ -1.93
BDNFP23560 MTND5P19-201ENST00000424872 1794 ntBASIC2.98□□□□□ -1.93
BDNFP23560 SNORA51.4-201ENST00000364993 124 ntBASIC2.98□□□□□ -1.93
BDNFP23560 RNU6-39P-201ENST00000384344 107 ntBASIC2.98□□□□□ -1.93
BDNFP23560 Y_RNA.510-201ENST00000384511 114 ntBASIC2.98□□□□□ -1.93
BDNFP23560 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
BDNFP23560 RN7SKP58-201ENST00000411010 305 ntBASIC2.98□□□□□ -1.93
BDNFP23560 RNA5SP111-201ENST00000411386 101 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AC005005.2-201ENST00000420779 380 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AL365400.1-201ENST00000431854 640 ntBASIC2.98□□□□□ -1.93
BDNFP23560 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.98□□□□□ -1.93
BDNFP23560 MTND6P13-201ENST00000443510 523 ntBASIC2.98□□□□□ -1.93
BDNFP23560 HIGD1AP2-201ENST00000446367 280 ntBASIC2.98□□□□□ -1.93
BDNFP23560 SMURF2P1-201ENST00000514992 481 ntBASIC2.98□□□□□ -1.93
BDNFP23560 RNA5SP356-201ENST00000515972 94 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.98□□□□□ -1.93
BDNFP23560 AC090136.1-201ENST00000520009 240 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.98□□□□□ -1.93
BDNFP23560 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.98□□□□□ -1.93
BDNFP23560 AC068276.1-201ENST00000605793 379 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AC126118.1-201ENST00000607744 628 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AC008250.2-201ENST00000615261 205 ntBASIC2.98□□□□□ -1.93
BDNFP23560 AC245884.12-201ENST00000615364 59 ntBASIC2.98□□□□□ -1.93
BDNFP23560 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BDNFP23560 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BDNFP23560 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.98□□□□□ -1.93
BDNFP23560 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.97□□□□□ -1.93
BDNFP23560 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
BDNFP23560 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
BDNFP23560 CISD1P1-201ENST00000393907 327 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AL139039.1-201ENST00000401900 692 ntBASIC2.97□□□□□ -1.93
BDNFP23560 RPS3AP3-201ENST00000411933 242 ntBASIC2.97□□□□□ -1.93
BDNFP23560 BMS1P22-201ENST00000414726 313 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC138623.1-201ENST00000418060 216 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC073614.1-201ENST00000438690 650 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.97□□□□□ -1.93
BDNFP23560 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.97□□□□□ -1.93
BDNFP23560 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC079781.2-201ENST00000446424 169 ntBASIC2.97□□□□□ -1.93
BDNFP23560 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.97□□□□□ -1.93
BDNFP23560 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.97□□□□□ -1.93
BDNFP23560 SNORA59A-201ENST00000459326 152 ntBASIC2.97□□□□□ -1.93
BDNFP23560 DYNLL1P5-201ENST00000467158 270 ntBASIC2.97□□□□□ -1.93
BDNFP23560 MED28P2-201ENST00000475771 317 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC114781.4-201ENST00000513707 639 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.97□□□□□ -1.93
BDNFP23560 AL138976.2-201ENST00000563989 694 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.97□□□□□ -1.93
BDNFP23560 AC005771.1-201ENST00000585581 349 ntBASIC2.97□□□□□ -1.93
BDNFP23560 RPS15AP11-201ENST00000594193 385 ntBASIC2.97□□□□□ -1.93
BDNFP23560 NIFKP6-201ENST00000598115 845 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC025165.5-201ENST00000602802 578 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AL049779.4-201ENST00000604500 156 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AL355297.2-201ENST00000604792 129 ntBASIC2.97□□□□□ -1.93
BDNFP23560 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.97□□□□□ -1.93
BDNFP23560 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
BDNFP23560 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
BDNFP23560 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
BDNFP23560 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
BDNFP23560 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.97□□□□□ -1.93
BDNFP23560 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.96□□□□□ -1.94
BDNFP23560 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
BDNFP23560 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.96□□□□□ -1.94
BDNFP23560 FTH1P15-201ENST00000406984 280 ntBASIC2.96□□□□□ -1.94
BDNFP23560 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.96□□□□□ -1.94
BDNFP23560 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.96□□□□□ -1.94
BDNFP23560 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.96□□□□□ -1.94
BDNFP23560 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BDNFP23560 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BDNFP23560 AL033528.1-201ENST00000453780 140 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AC004924.1-201ENST00000480160 781 ntBASIC2.96□□□□□ -1.94
BDNFP23560 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BDNFP23560 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.96□□□□□ -1.94
BDNFP23560 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.96□□□□□ -1.94
BDNFP23560 AC117522.3-201ENST00000507974 584 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.96□□□□□ -1.94
BDNFP23560 RNU6-759P-201ENST00000516740 103 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.96□□□□□ -1.94
BDNFP23560 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AC022616.3-201ENST00000523940 148 ntBASIC2.96□□□□□ -1.94
BDNFP23560 HPRT1P3-201ENST00000539521 576 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AC087883.1-201ENST00000551882 391 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.96□□□□□ -1.94
BDNFP23560 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.96□□□□□ -1.94
BDNFP23560 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms