Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RPL23AP50-201ENST00000434149 455 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 USP9YP7-201ENST00000436723 430 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 SNORA71B-202ENST00000439232 272 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 USP9YP32-201ENST00000452432 430 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN1P18031 PCMTD1P1-201ENST00000455560 355 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 RPL12P25-201ENST00000455592 494 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 BTF3P15-201ENST00000455606 336 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN1P18031 U8.18-201ENST00000459285 133 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AL133162.1-201ENST00000463228 453 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AC011005.2-201ENST00000487324 359 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AL160314.1-201ENST00000490836 438 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN1P18031 SLC25A15P5-201ENST00000508033 253 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN1P18031 AL117187.1-201ENST00000555482 181 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN1P18031 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN1P18031 AL160281.1-201ENST00000605307 311 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 SNORA62.6-201ENST00000606322 83 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AL121772.2-201ENST00000614331 297 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN1P18031 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.03□□□□□ -1.76
PTPN1P18031 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
PTPN1P18031 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN1P18031 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN1P18031 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN1P18031 MTND5P1-201ENST00000445440 1375 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN1P18031 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN1P18031 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN1P18031 Y_RNA.428-201ENST00000384078 102 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 RNU6-196P-201ENST00000384315 107 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 Y_RNA.496-201ENST00000384444 101 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 MIR23B-201ENST00000384832 97 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTPN1P18031 Y_RNA.605-201ENST00000410577 105 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 CYP4F29P-201ENST00000420685 446 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN1P18031 SNRPEP4-201ENST00000435815 279 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 FTH1P25-201ENST00000447665 469 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN1P18031 GSTA11P-201ENST00000452866 669 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 FABP5P15-201ENST00000453566 214 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN1P18031 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN1P18031 RAC1P2-201ENST00000511164 579 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 SNORA31.8-201ENST00000516327 108 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 RNU6-764P-201ENST00000516396 105 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 SNORD116.3-201ENST00000517176 78 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN1P18031 AC004024.1-201ENST00000549244 247 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 AC109446.1-201ENST00000566172 220 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 MIR5187-201ENST00000583479 76 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 AC090132.2-201ENST00000615881 347 ntBASIC4.02□□□□□ -1.77
PTPN1P18031 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN1P18031 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN1P18031 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PTPN1P18031 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN1P18031 SNORA7.2-201ENST00000364446 145 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 Y_RNA.245-201ENST00000364493 95 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 SNORA41-201ENST00000384675 132 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 RNU6-55P-201ENST00000411092 107 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN1P18031 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN1P18031 AC243428.1-201ENST00000421099 264 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AL133396.1-201ENST00000432048 687 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN1P18031 IPO7P1-201ENST00000442031 636 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN1P18031 RPS23P3-201ENST00000470993 430 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 RNU6-120P-201ENST00000516077 103 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 SNORA67.7-201ENST00000516664 135 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 RNU6-264P-201ENST00000517134 104 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN1P18031 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN1P18031 MIR4644-201ENST00000579929 84 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 MIR4429-201ENST00000580105 73 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PTPN1P18031 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN1P18031 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN1P18031 AL137849.1-201ENST00000604767 169 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AC005014.2-201ENST00000607795 599 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AL591516.1-201ENST00000611326 274 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AC006133.1-201ENST00000617106 264 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AC039056.2-201ENST00000622261 511 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 CR392039.5-201ENST00000623201 510 ntBASIC4.01□□□□□ -1.77
PTPN1P18031 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN1P18031 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN1P18031 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN1P18031 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN1P18031 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN1P18031 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
PTPN1P18031 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN1P18031 RNA5SP124-201ENST00000362739 110 ntBASIC4□□□□□ -1.77
PTPN1P18031 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN1P18031 RNU2-33P-201ENST00000410344 192 ntBASIC4□□□□□ -1.77
PTPN1P18031 AL030996.1-201ENST00000411430 235 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 248.9 ms