Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.237-201ENST00000364439 102 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RNU1-44P-201ENST00000384453 163 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 Y_RNA.526-201ENST00000384572 110 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 SNORD66.1-201ENST00000391230 76 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 AC093578.1-201ENST00000415219 368 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RPL23AP83-201ENST00000434984 473 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 USP9YP7-201ENST00000436723 430 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RPS26P2-201ENST00000440331 348 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 USP9YP32-201ENST00000452432 430 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-1256P-201ENST00000516539 103 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RNU7-4P-201ENST00000516961 62 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-1315P-201ENST00000517187 99 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 AL390123.1-201ENST00000603216 237 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 AL161798.1-201ENST00000604630 131 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 MIR1244-1-201ENST00000612829 85 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 AL031601.2-202ENST00000622650 282 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 MIR1244-3-201ENST00000635744 85 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 MIR1244-2-201ENST00000636449 85 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 MIR1244-4-202ENST00000636813 85 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AL672167.1-204ENST00000641875 3017 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 SNORA7.2-201ENST00000364446 145 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 SNORA73.2-201ENST00000364946 201 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 RNA5SP240-201ENST00000365355 128 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 Y_RNA.506-201ENST00000384494 102 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 MIR301A-201ENST00000385261 86 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 SNORD58.1-201ENST00000391313 66 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 RAB9AP3-201ENST00000412737 573 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AL356867.1-201ENST00000429623 299 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 RAB9AP1-201ENST00000449393 573 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 RNU7-138P-201ENST00000459479 64 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AP000926.1-201ENST00000479573 241 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-1073P-201ENST00000517182 106 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AC069113.1-201ENST00000517763 267 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 MIR3936-201ENST00000584304 110 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AC010620.2-201ENST00000600135 313 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 LINC01355-201ENST00000566551 5444 ntBASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSB-PGBD3P0DP91 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-596P-201ENST00000365395 98 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-611P-201ENST00000384276 104 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 Y_RNA.471-201ENST00000384312 102 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 MIR215-201ENST00000384858 110 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 MIR7-3-201ENST00000384898 110 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 SNORD73A-201ENST00000386062 65 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-493P-201ENST00000391321 108 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 SAR1AP2-201ENST00000392696 594 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 MIR1290-201ENST00000408735 78 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 AC006011.1-201ENST00000442758 349 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 RPS20P22-201ENST00000473700 357 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 AC006499.6-201ENST00000511169 607 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 SNORA31.8-201ENST00000516327 108 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 SNORA51-201ENST00000606420 132 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 AC006023.2-201ENST00000609916 167 ntBASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.51□□□□□ -1.53
CSB-PGBD3P0DP91 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-1179P-201ENST00000384667 107 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AL603910.2-201ENST00000407268 136 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AL139156.1-201ENST00000412785 841 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 RPL27AP8-201ENST00000424277 446 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 RPEP5-201ENST00000441137 268 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AC069499.1-201ENST00000489433 509 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AC008716.1-201ENST00000511084 513 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AC026726.1-201ENST00000512859 601 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms