Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SNORD97-201ENST00000459187 142 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC005178.1-201ENST00000508392 440 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC118465.1-201ENST00000513820 1271 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNU6-581P-201ENST00000516214 105 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNU6-759P-201ENST00000516740 103 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNA5SP337-201ENST00000517007 109 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNU6-1183P-201ENST00000517054 60 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 MRPS36P5-201ENST00000551909 298 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 NACAP3-201ENST00000552100 481 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL121821.2-201ENST00000556081 394 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC007151.1-201ENST00000572774 483 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.6-201ENST00000603753 252 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.11-201ENST00000604059 253 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL355598.1-201ENST00000604169 202 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC104763.2-201ENST00000604179 382 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC008162.1-201ENST00000604718 254 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.1-201ENST00000604752 252 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.5-201ENST00000605253 252 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.12-201ENST00000605291 253 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.8-201ENST00000605353 252 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL670379.7-201ENST00000605823 252 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AC022893.3-201ENST00000607665 437 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL365204.3-201ENST00000612448 685 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 HMGB1P24-202ENST00000615653 685 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 PISRT1-201ENST00000626175 531 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL512643.1-201ENST00000635735 524 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 SNORA4.3-201ENST00000365564 137 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 RNU6-946P-201ENST00000383878 107 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC007064.1-201ENST00000412238 351 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL591212.2-201ENST00000433923 257 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC092001.1-201ENST00000453012 261 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 RNU7-26P-201ENST00000458980 63 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC128713.1-201ENST00000471495 306 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AP000797.1-201ENST00000478870 387 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC022447.1-201ENST00000515358 464 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC008015.1-201ENST00000555505 465 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 ROCK1P1-201ENST00000573767 549 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 MIR3167-201ENST00000579623 85 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC090616.2-202ENST00000584248 222 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 WISP1-OT1-201ENST00000602893 642 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 BNIP3P9-201ENST00000603714 553 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL022161.1-201ENST00000604390 213 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC018638.7-201ENST00000605836 1114 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL031775.1-201ENST00000607014 887 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC011939.3-201ENST00000613686 466 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC009159.2-201ENST00000617603 606 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 U6.99-201ENST00000637524 83 ntBASIC1.89□□□□□ -2.11
HLA-DPB1P04440 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPB1P04440 AL137003.2-201ENST00000606924 2538 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 SNORA75B-201ENST00000384053 137 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 RNU6-39P-201ENST00000384344 107 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 Y_RNA.560-201ENST00000384689 102 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 MIR218-1-201ENST00000384999 110 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AL139413.1-201ENST00000421309 217 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AL356583.2-201ENST00000426536 280 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC004383.1-201ENST00000438135 289 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AL139824.2-201ENST00000458731 1095 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 NDUFB4P2-201ENST00000509515 391 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 RPL23AP94-201ENST00000512518 302 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 RNU6-914P-201ENST00000516749 109 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 OR5B19P-201ENST00000531766 928 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms