Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RSU1P2-202ENST00000437884 485 ntBASIC1.54□□□□□ -2.16
APOEP02649 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.54□□□□□ -2.16
APOEP02649 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.54□□□□□ -2.16
APOEP02649 AL357134.1-201ENST00000445848 426 ntBASIC1.54□□□□□ -2.16
APOEP02649 AL353718.1-201ENST00000451028 517 ntBASIC1.54□□□□□ -2.16
APOEP02649 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.54□□□□□ -2.16
APOEP02649 CYP2C59P-201ENST00000457790 269 ntBASIC1.54□□□□□ -2.16
APOEP02649 AC139453.3-201ENST00000493276 369 ntBASIC1.54□□□□□ -2.16
APOEP02649 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.54□□□□□ -2.16
APOEP02649 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.54□□□□□ -2.16
APOEP02649 RNU6-703P-201ENST00000516946 107 ntBASIC1.54□□□□□ -2.16
APOEP02649 AC034114.1-201ENST00000520293 285 ntBASIC1.54□□□□□ -2.16
APOEP02649 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.54□□□□□ -2.16
APOEP02649 MIR5708-201ENST00000579723 85 ntBASIC1.54□□□□□ -2.16
APOEP02649 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.54□□□□□ -2.16
APOEP02649 SEPT7P9-203ENST00000604116 343 ntBASIC1.54□□□□□ -2.16
APOEP02649 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.54□□□□□ -2.16
APOEP02649 AP005229.2-201ENST00000609980 697 ntBASIC1.54□□□□□ -2.16
APOEP02649 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.54□□□□□ -2.16
APOEP02649 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.54□□□□□ -2.16
APOEP02649 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
APOEP02649 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.54□□□□□ -2.16
APOEP02649 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
APOEP02649 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.54□□□□□ -2.16
APOEP02649 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
APOEP02649 RNA5SP432-201ENST00000362480 116 ntBASIC1.53□□□□□ -2.16
APOEP02649 RNU6-432P-201ENST00000384196 109 ntBASIC1.53□□□□□ -2.16
APOEP02649 MIR95-201ENST00000385072 81 ntBASIC1.53□□□□□ -2.16
APOEP02649 RNU6-174P-201ENST00000410406 106 ntBASIC1.53□□□□□ -2.16
APOEP02649 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
APOEP02649 MTCO3P45-201ENST00000443036 613 ntBASIC1.53□□□□□ -2.16
APOEP02649 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.53□□□□□ -2.16
APOEP02649 AL096829.2-201ENST00000446582 742 ntBASIC1.53□□□□□ -2.16
APOEP02649 AC020550.1-201ENST00000447385 163 ntBASIC1.53□□□□□ -2.16
APOEP02649 ARPC3P5-201ENST00000448802 534 ntBASIC1.53□□□□□ -2.16
APOEP02649 OR6C5P-201ENST00000452388 923 ntBASIC1.53□□□□□ -2.16
APOEP02649 MTND1P9-201ENST00000453775 944 ntBASIC1.53□□□□□ -2.16
APOEP02649 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.53□□□□□ -2.16
APOEP02649 AC112771.1-201ENST00000463581 102 ntBASIC1.53□□□□□ -2.16
APOEP02649 AC021146.2-201ENST00000504736 556 ntBASIC1.53□□□□□ -2.16
APOEP02649 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.53□□□□□ -2.16
APOEP02649 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
APOEP02649 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
APOEP02649 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.53□□□□□ -2.16
APOEP02649 DUXAP1-201ENST00000556632 463 ntBASIC1.53□□□□□ -2.16
APOEP02649 AC021171.1-201ENST00000603137 706 ntBASIC1.53□□□□□ -2.16
APOEP02649 AL355598.1-201ENST00000604169 202 ntBASIC1.53□□□□□ -2.16
APOEP02649 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
APOEP02649 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APOEP02649 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.53□□□□□ -2.16
APOEP02649 AC091304.6-201ENST00000619761 202 ntBASIC1.53□□□□□ -2.16
APOEP02649 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.53□□□□□ -2.16
APOEP02649 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.53□□□□□ -2.16
APOEP02649 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APOEP02649 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APOEP02649 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.53□□□□□ -2.17
APOEP02649 AL161781.1-201ENST00000354277 403 ntBASIC1.52□□□□□ -2.17
APOEP02649 MIR126-201ENST00000362291 85 ntBASIC1.52□□□□□ -2.17
APOEP02649 RNU1-23P-201ENST00000363361 144 ntBASIC1.52□□□□□ -2.17
APOEP02649 RNU6-1122P-201ENST00000384449 107 ntBASIC1.52□□□□□ -2.17
APOEP02649 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
APOEP02649 AL079342.2-201ENST00000403367 482 ntBASIC1.52□□□□□ -2.17
APOEP02649 AL133475.1-201ENST00000404414 305 ntBASIC1.52□□□□□ -2.17
APOEP02649 MTND1P21-201ENST00000412991 285 ntBASIC1.52□□□□□ -2.17
APOEP02649 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.52□□□□□ -2.17
APOEP02649 GPM6BP2-201ENST00000432046 144 ntBASIC1.52□□□□□ -2.17
APOEP02649 MTCO1P53-201ENST00000441633 699 ntBASIC1.52□□□□□ -2.17
APOEP02649 GPM6BP1-201ENST00000446387 144 ntBASIC1.52□□□□□ -2.17
APOEP02649 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOEP02649 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
APOEP02649 AC018437.1-201ENST00000492214 406 ntBASIC1.52□□□□□ -2.17
APOEP02649 RNU6-991P-201ENST00000516168 107 ntBASIC1.52□□□□□ -2.17
APOEP02649 DUXAP5-201ENST00000529668 529 ntBASIC1.52□□□□□ -2.17
APOEP02649 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APOEP02649 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.52□□□□□ -2.17
APOEP02649 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.52□□□□□ -2.17
APOEP02649 AL353997.4-201ENST00000586196 166 ntBASIC1.52□□□□□ -2.17
APOEP02649 AL713866.2-201ENST00000603579 219 ntBASIC1.52□□□□□ -2.17
APOEP02649 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.52□□□□□ -2.17
APOEP02649 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.52□□□□□ -2.17
APOEP02649 AC078880.5-201ENST00000617845 421 ntBASIC1.52□□□□□ -2.17
APOEP02649 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.52□□□□□ -2.17
APOEP02649 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.52□□□□□ -2.17
APOEP02649 NACAP2-201ENST00000318548 624 ntBASIC1.51□□□□□ -2.17
APOEP02649 Y_RNA.408-201ENST00000383987 102 ntBASIC1.51□□□□□ -2.17
APOEP02649 RNU6-468P-201ENST00000384003 109 ntBASIC1.51□□□□□ -2.17
APOEP02649 RNU4-62P-201ENST00000410125 130 ntBASIC1.51□□□□□ -2.17
APOEP02649 AC068533.2-201ENST00000411872 306 ntBASIC1.51□□□□□ -2.17
APOEP02649 MTCO2P1-201ENST00000424648 477 ntBASIC1.51□□□□□ -2.17
APOEP02649 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.51□□□□□ -2.17
APOEP02649 USP9YP24-201ENST00000434374 697 ntBASIC1.51□□□□□ -2.17
APOEP02649 AL353706.1-201ENST00000436728 494 ntBASIC1.51□□□□□ -2.17
APOEP02649 MTND4P6-201ENST00000438297 472 ntBASIC1.51□□□□□ -2.17
APOEP02649 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.51□□□□□ -2.17
APOEP02649 FABP5P15-201ENST00000453566 214 ntBASIC1.51□□□□□ -2.17
APOEP02649 TPT1P8-201ENST00000510120 555 ntBASIC1.51□□□□□ -2.17
APOEP02649 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.51□□□□□ -2.17
APOEP02649 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
APOEP02649 SNRPGP1-201ENST00000553864 222 ntBASIC1.51□□□□□ -2.17
APOEP02649 BNIP3P25-201ENST00000596023 559 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms