Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC098591.2-201ENST00000510152 315 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.7□□□□□ -1.82
COL3A1P02461 AC108471.1-201ENST00000513977 287 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 RN7SKP96-201ENST00000516948 297 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.7□□□□□ -1.82
COL3A1P02461 AC105224.1-201ENST00000587055 421 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.7□□□□□ -1.82
COL3A1P02461 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.7□□□□□ -1.82
COL3A1P02461 AC133104.2-201ENST00000615272 193 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 Z69720.2-201ENST00000624755 279 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 AC092593.1-201ENST00000515413 1815 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 Y_RNA.176-201ENST00000363815 109 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 RNU6-784P-201ENST00000384330 106 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 MIR454-201ENST00000390180 115 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RNU6-370P-201ENST00000411008 104 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RPS12P24-201ENST00000412619 387 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC112220.1-201ENST00000434628 355 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.69□□□□□ -1.82
COL3A1P02461 RPS3P1-201ENST00000456781 192 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RNU6-1208P-201ENST00000459588 107 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC078817.1-201ENST00000492623 435 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC026782.1-201ENST00000512952 449 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RN7SKP24-201ENST00000515888 284 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 SNORD27.1-201ENST00000516319 72 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RN7SKP219-201ENST00000516825 296 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RN7SKP295-201ENST00000517264 153 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.69□□□□□ -1.82
COL3A1P02461 LSM6P2-201ENST00000552208 177 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC026470.2-201ENST00000561492 181 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 MYL12BP1-201ENST00000569826 507 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 LARP7P2-201ENST00000575306 125 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 MIR4644-201ENST00000579929 84 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.69□□□□□ -1.82
COL3A1P02461 AC068790.3-201ENST00000602988 553 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC090115.4-201ENST00000609970 188 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 AC006111.3-201ENST00000622137 383 ntBASIC3.69□□□□□ -1.82
COL3A1P02461 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL3A1P02461 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL3A1P02461 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL3A1P02461 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL3A1P02461 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL3A1P02461 RNU6-28P-201ENST00000362378 107 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU6-859P-201ENST00000362728 107 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU6-343P-201ENST00000364709 104 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU4-20P-201ENST00000365601 151 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU6-903P-201ENST00000391270 109 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 MIR548F5-201ENST00000408421 86 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 OR4K11P-201ENST00000431829 904 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 AL121890.1-201ENST00000435457 205 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 HMGB1P15-201ENST00000453854 435 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 AL583843.1-201ENST00000456070 346 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 ELOCP24-201ENST00000456370 334 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU7-182P-201ENST00000459009 62 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.68□□□□□ -1.82
COL3A1P02461 AC106872.2-201ENST00000494303 480 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 MTCYBP40-201ENST00000509390 1135 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU6-764P-201ENST00000516396 105 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 RNU6-566P-201ENST00000516790 107 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.68□□□□□ -1.82
COL3A1P02461 AC023442.1-201ENST00000531247 422 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL3A1P02461 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.68□□□□□ -1.82
COL3A1P02461 OR4K8P-201ENST00000578842 1048 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.68□□□□□ -1.82
COL3A1P02461 AC007998.5-201ENST00000622938 237 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 MTND5P19-201ENST00000424872 1794 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL3A1P02461 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL3A1P02461 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL3A1P02461 AC134882.1-201ENST00000603738 1676 ntBASIC3.68□□□□□ -1.82
COL3A1P02461 HSPE1P11-201ENST00000339579 310 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL3A1P02461 MIR649-201ENST00000384843 97 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL3A1P02461 AL603908.1-201ENST00000406098 201 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 MIR548F4-201ENST00000408515 105 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 RNU2-29P-201ENST00000410423 189 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL3A1P02461 OR6C66P-201ENST00000414917 930 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 FABP5P14-201ENST00000437273 393 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.67□□□□□ -1.82
COL3A1P02461 AL035666.1-201ENST00000446195 348 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.67□□□□□ -1.82
COL3A1P02461 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.67□□□□□ -1.82
COL3A1P02461 RPL30P15-201ENST00000457129 321 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 AL049714.1-201ENST00000466686 347 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 AC055855.1-201ENST00000489563 579 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.67□□□□□ -1.82
COL3A1P02461 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.67□□□□□ -1.82
COL3A1P02461 SNORA25.10-201ENST00000515926 124 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 RNU6-976P-201ENST00000516086 111 ntBASIC3.67□□□□□ -1.82
COL3A1P02461 RNU6-1088P-201ENST00000516850 104 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms