Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4BO75351 SCARNA15.3-201ENST00000626315 122 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 SCARNA4.1-201ENST00000628597 123 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AL512643.1-201ENST00000635735 524 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AL732372.2-225ENST00000642124 456 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS4BO75351 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
VPS4BO75351 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS4BO75351 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS4BO75351 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VPS4BO75351 AP001148.1-201ENST00000624124 2359 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS4BO75351 AL359693.1-201ENST00000614959 2407 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VPS4BO75351 AF127577.6-201ENST00000623352 2191 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 Y_RNA.394-201ENST00000383942 103 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 RPS4XP7-201ENST00000406274 780 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 CYCSP33-201ENST00000414485 327 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AL035423.1-201ENST00000420331 213 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 MYL8P-204ENST00000431574 518 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 CYCSP32-201ENST00000440548 321 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AC107399.1-201ENST00000451226 265 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AL049830.2-201ENST00000480072 201 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 RN7SL293P-201ENST00000481765 281 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS4BO75351 UBE2CP3-201ENST00000502715 450 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS4BO75351 RNU6-143P-201ENST00000516942 93 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4BO75351 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS4BO75351 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS4BO75351 AL157871.3-201ENST00000557231 293 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 TRAV28-201ENST00000557548 323 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AC007151.1-201ENST00000572774 483 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AC100830.2-201ENST00000581636 240 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 APOOP1-201ENST00000604695 592 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AC106900.2-201ENST00000604994 317 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 AC006023.2-201ENST00000609916 167 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
VPS4BO75351 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4BO75351 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS4BO75351 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
VPS4BO75351 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS4BO75351 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS4BO75351 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS4BO75351 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 RNU6-266P-201ENST00000364225 107 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RNU6-1303P-201ENST00000364841 107 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 Y_RNA.315-201ENST00000365117 102 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 SNORA75B-201ENST00000384053 137 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RNU6-1297P-201ENST00000384415 104 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 SNORD116-29-201ENST00000384516 83 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RNU2-71P-201ENST00000411395 189 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 BTF3L4P3-201ENST00000418879 476 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AL139396.1-201ENST00000421137 167 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AL590383.1-201ENST00000428602 75 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 SNAP23P1-201ENST00000433229 246 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS4BO75351 AC009237.8-201ENST00000445492 379 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RNU7-152P-201ENST00000458982 64 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS4BO75351 MTND3P25-201ENST00000509243 135 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 TBCAP3-201ENST00000512475 312 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RN7SKP13-201ENST00000515933 244 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RNA5SP468-201ENST00000516782 93 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AC087854.1-201ENST00000519706 414 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS4BO75351 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS4BO75351 FRG2DP-202ENST00000566967 323 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 MIR4790-201ENST00000577799 79 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS4BO75351 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS4BO75351 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS4BO75351 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AC098657.3-201ENST00000620434 263 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AL031601.2-202ENST00000622650 282 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 AC048347.1-201ENST00000624621 427 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS4BO75351 U6.105-201ENST00000637379 88 ntBASIC3.6□□□□□ -1.83
VPS4BO75351 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
VPS4BO75351 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
VPS4BO75351 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS4BO75351 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS4BO75351 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS4BO75351 Y_RNA.33-201ENST00000362591 102 ntBASIC3.59□□□□□ -1.83
VPS4BO75351 Y_RNA.245-201ENST00000364493 95 ntBASIC3.59□□□□□ -1.83
VPS4BO75351 RNU6-395P-201ENST00000365662 106 ntBASIC3.59□□□□□ -1.83
VPS4BO75351 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS4BO75351 U8.11-201ENST00000384699 133 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms