Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL158209.2-201ENST00000619266 216 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AC068137.4-201ENST00000638485 296 ntBASIC2.67□□□□□ -1.98
SNX3O60493 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX3O60493 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
SNX3O60493 RNU6-1287P-201ENST00000362914 107 ntBASIC2.66□□□□□ -1.98
SNX3O60493 Y_RNA.381-201ENST00000365666 102 ntBASIC2.66□□□□□ -1.98
SNX3O60493 Z98749.2-208ENST00000381646 500 ntBASIC2.66□□□□□ -1.98
SNX3O60493 RNU6-1060P-201ENST00000384664 107 ntBASIC2.66□□□□□ -1.98
SNX3O60493 MIR578-201ENST00000384828 96 ntBASIC2.66□□□□□ -1.98
SNX3O60493 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
SNX3O60493 SNORA40C-201ENST00000391285 128 ntBASIC2.66□□□□□ -1.98
SNX3O60493 MIR1289-1-201ENST00000408836 144 ntBASIC2.66□□□□□ -1.98
SNX3O60493 RPL7P37-201ENST00000425095 738 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC007560.1-201ENST00000426912 237 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX3O60493 AC000111.3-201ENST00000433478 193 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX3O60493 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC128713.1-201ENST00000471495 306 ntBASIC2.66□□□□□ -1.98
SNX3O60493 RPL9P6-201ENST00000492764 598 ntBASIC2.66□□□□□ -1.98
SNX3O60493 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
SNX3O60493 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX3O60493 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX3O60493 AC092436.1-201ENST00000506450 503 ntBASIC2.66□□□□□ -1.98
SNX3O60493 SAP18P1-201ENST00000512058 390 ntBASIC2.66□□□□□ -1.98
SNX3O60493 SUB1P1-201ENST00000524415 382 ntBASIC2.66□□□□□ -1.98
SNX3O60493 PSMA2P1-201ENST00000526365 646 ntBASIC2.66□□□□□ -1.98
SNX3O60493 OR5BN1P-201ENST00000532955 829 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC022880.1-201ENST00000534017 973 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX3O60493 AC245505.1-201ENST00000556398 224 ntBASIC2.66□□□□□ -1.98
SNX3O60493 CYCSP39-201ENST00000565821 309 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC008752.3-201ENST00000588113 712 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AL109618.2-201ENST00000605527 211 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AL137847.3-201ENST00000611521 109 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC015540.1-201ENST00000615828 501 ntBASIC2.66□□□□□ -1.98
SNX3O60493 UCA1.1-201ENST00000620952 75 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC139792.2-201ENST00000624218 587 ntBASIC2.66□□□□□ -1.98
SNX3O60493 AC034229.5-201ENST00000624258 185 ntBASIC2.66□□□□□ -1.98
SNX3O60493 MIR6863-201ENST00000636112 90 ntBASIC2.66□□□□□ -1.98
SNX3O60493 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX3O60493 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX3O60493 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNX3O60493 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNX3O60493 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.65□□□□□ -1.98
SNX3O60493 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SNX3O60493 OR4G2P-201ENST00000328113 903 ntBASIC2.65□□□□□ -1.99
SNX3O60493 SNORD3E-201ENST00000362899 217 ntBASIC2.65□□□□□ -1.99
SNX3O60493 SNORA71.1-201ENST00000364523 117 ntBASIC2.65□□□□□ -1.99
SNX3O60493 RNU1-100P-201ENST00000365255 165 ntBASIC2.65□□□□□ -1.99
SNX3O60493 Y_RNA.409-201ENST00000383990 98 ntBASIC2.65□□□□□ -1.99
SNX3O60493 RNU6-166P-201ENST00000384371 107 ntBASIC2.65□□□□□ -1.99
SNX3O60493 MIR200C-201ENST00000384980 68 ntBASIC2.65□□□□□ -1.99
SNX3O60493 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SNX3O60493 AL356057.2-201ENST00000403318 432 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AL591416.1-201ENST00000404015 867 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AL356967.1-201ENST00000406305 431 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX3O60493 MTCO3P30-201ENST00000426425 670 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX3O60493 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX3O60493 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.65□□□□□ -1.99
SNX3O60493 AL596276.1-201ENST00000434465 418 ntBASIC2.65□□□□□ -1.99
SNX3O60493 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX3O60493 HMGN2P10-201ENST00000448085 265 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AL118520.1-201ENST00000450770 291 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX3O60493 AC112206.3-201ENST00000514578 389 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC008885.1-201ENST00000514930 301 ntBASIC2.65□□□□□ -1.99
SNX3O60493 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.65□□□□□ -1.99
SNX3O60493 AC021739.1-201ENST00000559631 174 ntBASIC2.65□□□□□ -1.99
SNX3O60493 MIR4703-201ENST00000577728 79 ntBASIC2.65□□□□□ -1.99
SNX3O60493 MIR4782-201ENST00000577987 79 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX3O60493 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.65□□□□□ -1.99
SNX3O60493 MIR548AC-201ENST00000585049 88 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.65□□□□□ -1.99
SNX3O60493 AL020997.2-201ENST00000602607 184 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AL355877.2-201ENST00000603670 358 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AL138889.2-201ENST00000603883 242 ntBASIC2.65□□□□□ -1.99
SNX3O60493 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.65□□□□□ -1.99
SNX3O60493 AC124864.2-201ENST00000624736 186 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AC005609.4-201ENST00000625071 447 ntBASIC2.65□□□□□ -1.99
SNX3O60493 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SNX3O60493 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.65□□□□□ -1.99
SNX3O60493 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.65□□□□□ -1.99
SNX3O60493 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNX3O60493 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SNX3O60493 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SNX3O60493 RNU6-371P-201ENST00000364283 108 ntBASIC2.64□□□□□ -1.99
SNX3O60493 MIR134-201ENST00000385258 73 ntBASIC2.64□□□□□ -1.99
SNX3O60493 RPL21P75-201ENST00000396599 483 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms