Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB2O43679 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
LDB2O43679 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
LDB2O43679 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDB2O43679 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.18□□□□□ -1.9
LDB2O43679 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LDB2O43679 AC121333.1-201ENST00000567488 2709 ntBASIC3.18□□□□□ -1.9
LDB2O43679 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB2O43679 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.17□□□□□ -1.9
LDB2O43679 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB2O43679 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB2O43679 Y_RNA.61-201ENST00000362835 102 ntBASIC3.17□□□□□ -1.9
LDB2O43679 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
LDB2O43679 SNORA48.2-201ENST00000390926 124 ntBASIC3.17□□□□□ -1.9
LDB2O43679 EI24P2-201ENST00000397776 1076 ntBASIC3.17□□□□□ -1.9
LDB2O43679 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AL160275.3-201ENST00000423876 471 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AL365400.1-201ENST00000431854 640 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.17□□□□□ -1.9
LDB2O43679 RPS15AP27-201ENST00000449183 343 ntBASIC3.17□□□□□ -1.9
LDB2O43679 RPL37P6-201ENST00000460682 294 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.17□□□□□ -1.9
LDB2O43679 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.17□□□□□ -1.9
LDB2O43679 RNU6-1038P-201ENST00000516516 104 ntBASIC3.17□□□□□ -1.9
LDB2O43679 RNU6-1256P-201ENST00000516539 103 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.17□□□□□ -1.9
LDB2O43679 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB2O43679 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB2O43679 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB2O43679 AC106782.4-201ENST00000568264 210 ntBASIC3.17□□□□□ -1.9
LDB2O43679 MIR5680-201ENST00000577577 84 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.17□□□□□ -1.9
LDB2O43679 AC005000.2-201ENST00000605468 310 ntBASIC3.17□□□□□ -1.9
LDB2O43679 AC107294.1-201ENST00000609524 467 ntBASIC3.17□□□□□ -1.9
LDB2O43679 uc_338.5-201ENST00000611839 155 ntBASIC3.17□□□□□ -1.9
LDB2O43679 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
LDB2O43679 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
LDB2O43679 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB2O43679 MTND4P29-201ENST00000503122 1372 ntBASIC3.16□□□□□ -1.9
LDB2O43679 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDB2O43679 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LDB2O43679 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDB2O43679 Y_RNA.373-201ENST00000365600 103 ntBASIC3.16□□□□□ -1.9
LDB2O43679 Y_RNA.530-201ENST00000384587 101 ntBASIC3.16□□□□□ -1.9
LDB2O43679 MIR128-1-201ENST00000384921 82 ntBASIC3.16□□□□□ -1.9
LDB2O43679 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LDB2O43679 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB2O43679 RNA5SP129-201ENST00000410276 118 ntBASIC3.16□□□□□ -1.9
LDB2O43679 MTND3P8-201ENST00000412909 339 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AL590383.1-201ENST00000428602 75 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB2O43679 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.16□□□□□ -1.9
LDB2O43679 AC109925.1-201ENST00000478069 331 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB2O43679 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.16□□□□□ -1.9
LDB2O43679 TTC39CP1-201ENST00000512513 755 ntBASIC3.16□□□□□ -1.9
LDB2O43679 RN7SKP256-201ENST00000517201 314 ntBASIC3.16□□□□□ -1.9
LDB2O43679 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.16□□□□□ -1.9
LDB2O43679 OR11H5P-201ENST00000554039 926 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.16□□□□□ -1.9
LDB2O43679 AC021646.1-201ENST00000605469 484 ntBASIC3.16□□□□□ -1.9
LDB2O43679 MIR15A-201ENST00000607334 83 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AL591516.1-201ENST00000611326 274 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AC090132.2-201ENST00000615881 347 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AC009233.1-201ENST00000616477 371 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AC005858.4-201ENST00000623191 700 ntBASIC3.16□□□□□ -1.9
LDB2O43679 AL359697.1-201ENST00000624879 587 ntBASIC3.16□□□□□ -1.9
LDB2O43679 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.16□□□□□ -1.9
LDB2O43679 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDB2O43679 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.16□□□□□ -1.9
LDB2O43679 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LDB2O43679 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDB2O43679 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.16□□□□□ -1.9
LDB2O43679 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.16□□□□□ -1.9
LDB2O43679 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LDB2O43679 HSPA8P4-201ENST00000511877 1920 ntBASIC3.15□□□□□ -1.9
LDB2O43679 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LDB2O43679 UBE2L2-201ENST00000254302 429 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RNU6-50P-201ENST00000362356 103 ntBASIC3.15□□□□□ -1.91
LDB2O43679 Y_RNA.11-201ENST00000362375 109 ntBASIC3.15□□□□□ -1.91
LDB2O43679 Y_RNA.167-201ENST00000363735 109 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RNU6-715P-201ENST00000365204 103 ntBASIC3.15□□□□□ -1.91
LDB2O43679 Y_RNA.356-201ENST00000365475 113 ntBASIC3.15□□□□□ -1.91
LDB2O43679 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LDB2O43679 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB2O43679 Y_RNA.399-201ENST00000383955 105 ntBASIC3.15□□□□□ -1.91
LDB2O43679 SNORA7.4-201ENST00000384249 137 ntBASIC3.15□□□□□ -1.91
LDB2O43679 Y_RNA.534-201ENST00000384599 112 ntBASIC3.15□□□□□ -1.91
LDB2O43679 SNORD70.1-201ENST00000391007 85 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AL356432.1-201ENST00000405809 419 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
LDB2O43679 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.15□□□□□ -1.91
LDB2O43679 POLHP1-201ENST00000411806 470 ntBASIC3.15□□□□□ -1.91
LDB2O43679 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
LDB2O43679 Z85995.1-201ENST00000415547 335 ntBASIC3.15□□□□□ -1.91
LDB2O43679 USP9YP20-201ENST00000419224 558 ntBASIC3.15□□□□□ -1.91
LDB2O43679 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB2O43679 TAAR7P-201ENST00000436141 242 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms