Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 BZW1P2-201ENST00000473537 826 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC011005.2-201ENST00000487324 359 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC007182.2-201ENST00000489251 402 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.61□□□□□ -2.15
SGCEO43556 RPF2P2-201ENST00000504693 896 ntBASIC1.61□□□□□ -2.15
SGCEO43556 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SGCEO43556 RNU6-143P-201ENST00000516942 93 ntBASIC1.61□□□□□ -2.15
SGCEO43556 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.61□□□□□ -2.15
SGCEO43556 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.61□□□□□ -2.15
SGCEO43556 AC022880.1-201ENST00000534017 973 ntBASIC1.61□□□□□ -2.15
SGCEO43556 NDUFA5P6-201ENST00000542110 379 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC007375.1-201ENST00000554513 578 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.61□□□□□ -2.15
SGCEO43556 VN1R83P-201ENST00000595685 445 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AL713866.2-201ENST00000603579 219 ntBASIC1.61□□□□□ -2.15
SGCEO43556 SNRPGP17-201ENST00000603780 214 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC024060.1-201ENST00000607052 494 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC103710.2-201ENST00000609912 942 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.61□□□□□ -2.15
SGCEO43556 AC112204.3-201ENST00000623822 332 ntBASIC1.61□□□□□ -2.15
SGCEO43556 LINC02211-204ENST00000642024 1070 ntBASIC1.61□□□□□ -2.15
SGCEO43556 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.61□□□□□ -2.15
SGCEO43556 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SGCEO43556 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SGCEO43556 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.6□□□□□ -2.15
SGCEO43556 SNORD114-1-201ENST00000362705 72 ntBASIC1.6□□□□□ -2.15
SGCEO43556 RNU6-560P-201ENST00000364007 108 ntBASIC1.6□□□□□ -2.15
SGCEO43556 RNU6-188P-201ENST00000364207 107 ntBASIC1.6□□□□□ -2.15
SGCEO43556 RNU4-42P-201ENST00000364738 142 ntBASIC1.6□□□□□ -2.15
SGCEO43556 Y_RNA.311-201ENST00000365068 96 ntBASIC1.6□□□□□ -2.15
SGCEO43556 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
SGCEO43556 MIR19A-201ENST00000384878 82 ntBASIC1.6□□□□□ -2.15
SGCEO43556 RNU2-72P-201ENST00000411175 163 ntBASIC1.6□□□□□ -2.15
SGCEO43556 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.6□□□□□ -2.15
SGCEO43556 RPL23AP76-201ENST00000441860 458 ntBASIC1.6□□□□□ -2.15
SGCEO43556 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.6□□□□□ -2.15
SGCEO43556 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.6□□□□□ -2.15
SGCEO43556 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.6□□□□□ -2.15
SGCEO43556 AL137159.1-201ENST00000452808 512 ntBASIC1.6□□□□□ -2.15
SGCEO43556 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.6□□□□□ -2.15
SGCEO43556 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.6□□□□□ -2.15
SGCEO43556 RPL7P18-201ENST00000478965 734 ntBASIC1.6□□□□□ -2.15
SGCEO43556 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
SGCEO43556 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.6□□□□□ -2.15
SGCEO43556 AC008837.2-201ENST00000513076 418 ntBASIC1.6□□□□□ -2.15
SGCEO43556 HSBP1P1-201ENST00000555205 166 ntBASIC1.6□□□□□ -2.15
SGCEO43556 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.6□□□□□ -2.15
SGCEO43556 AC092574.1-201ENST00000609771 420 ntBASIC1.6□□□□□ -2.15
SGCEO43556 AC013412.1-201ENST00000610687 192 ntBASIC1.6□□□□□ -2.15
SGCEO43556 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.6□□□□□ -2.15
SGCEO43556 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SGCEO43556 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
SGCEO43556 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.59□□□□□ -2.15
SGCEO43556 RNU6-1284P-201ENST00000363701 100 ntBASIC1.59□□□□□ -2.15
SGCEO43556 RNU6-621P-201ENST00000364752 109 ntBASIC1.59□□□□□ -2.15
SGCEO43556 SNORA8-201ENST00000384574 139 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AL033519.2-201ENST00000403958 392 ntBASIC1.59□□□□□ -2.15
SGCEO43556 MIR320C1-201ENST00000408566 88 ntBASIC1.59□□□□□ -2.15
SGCEO43556 OR51A5P-201ENST00000415429 942 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.59□□□□□ -2.15
SGCEO43556 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.59□□□□□ -2.15
SGCEO43556 USP9YP11-201ENST00000427537 717 ntBASIC1.59□□□□□ -2.15
SGCEO43556 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.59□□□□□ -2.15
SGCEO43556 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.59□□□□□ -2.15
SGCEO43556 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.59□□□□□ -2.15
SGCEO43556 MTND1P16-201ENST00000465177 898 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC068587.2-201ENST00000478386 781 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC018868.1-201ENST00000491307 315 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC023194.1-201ENST00000493084 308 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.59□□□□□ -2.15
SGCEO43556 RNA5SP182-201ENST00000516064 82 ntBASIC1.59□□□□□ -2.15
SGCEO43556 RNU1-41P-201ENST00000516161 162 ntBASIC1.59□□□□□ -2.15
SGCEO43556 RNU1-48P-201ENST00000516400 162 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.59□□□□□ -2.15
SGCEO43556 AP000889.1-201ENST00000530968 660 ntBASIC1.59□□□□□ -2.15
SGCEO43556 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
SGCEO43556 AC110588.1-201ENST00000559699 137 ntBASIC1.59□□□□□ -2.15
SGCEO43556 MTND3P13-201ENST00000574391 343 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.59□□□□□ -2.15
SGCEO43556 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.59□□□□□ -2.15
SGCEO43556 AL078605.1-201ENST00000603529 500 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AL670379.10-201ENST00000604330 253 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AL670379.9-201ENST00000605428 253 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC096772.1-201ENST00000609146 564 ntBASIC1.59□□□□□ -2.15
SGCEO43556 RNU6-1192P-201ENST00000612197 107 ntBASIC1.59□□□□□ -2.15
SGCEO43556 RNU6-489P-201ENST00000618289 107 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AL158163.2-201ENST00000619110 700 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC123767.1-202ENST00000620407 817 ntBASIC1.59□□□□□ -2.15
SGCEO43556 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.59□□□□□ -2.15
SGCEO43556 AC126544.2-201ENST00000625174 749 ntBASIC1.59□□□□□ -2.15
SGCEO43556 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.59□□□□□ -2.15
SGCEO43556 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SGCEO43556 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SGCEO43556 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
SGCEO43556 RNU6-278P-201ENST00000390945 109 ntBASIC1.58□□□□□ -2.16
SGCEO43556 RNU6-1140P-201ENST00000410517 106 ntBASIC1.58□□□□□ -2.16
SGCEO43556 AL359704.1-201ENST00000411586 781 ntBASIC1.58□□□□□ -2.16
SGCEO43556 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.58□□□□□ -2.16
SGCEO43556 MTND2P29-201ENST00000438595 412 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms