Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.32□□□□□ -1.88
MSI1O43347 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
MSI1O43347 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.31□□□□□ -1.88
MSI1O43347 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.31□□□□□ -1.88
MSI1O43347 RNU6-845P-201ENST00000362578 103 ntBASIC3.31□□□□□ -1.88
MSI1O43347 RNU6-715P-201ENST00000365204 103 ntBASIC3.31□□□□□ -1.88
MSI1O43347 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MSI1O43347 DEFB109C-201ENST00000382575 264 ntBASIC3.31□□□□□ -1.88
MSI1O43347 DEFB109B-201ENST00000382656 264 ntBASIC3.31□□□□□ -1.88
MSI1O43347 SNORA16.2-201ENST00000390991 127 ntBASIC3.31□□□□□ -1.88
MSI1O43347 RNU6-1009P-201ENST00000390996 107 ntBASIC3.31□□□□□ -1.88
MSI1O43347 RNA5SP129-201ENST00000410276 118 ntBASIC3.31□□□□□ -1.88
MSI1O43347 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
MSI1O43347 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
MSI1O43347 TAAR7P-201ENST00000436141 242 ntBASIC3.31□□□□□ -1.88
MSI1O43347 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.31□□□□□ -1.88
MSI1O43347 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
MSI1O43347 RPL23AP94-201ENST00000512518 302 ntBASIC3.31□□□□□ -1.88
MSI1O43347 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.31□□□□□ -1.88
MSI1O43347 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
MSI1O43347 SCARNA20.6-201ENST00000517251 106 ntBASIC3.31□□□□□ -1.88
MSI1O43347 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.31□□□□□ -1.88
MSI1O43347 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.31□□□□□ -1.88
MSI1O43347 BTF3P12-201ENST00000519620 469 ntBASIC3.31□□□□□ -1.88
MSI1O43347 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.31□□□□□ -1.88
MSI1O43347 OR11H5P-201ENST00000554039 926 ntBASIC3.31□□□□□ -1.88
MSI1O43347 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
MSI1O43347 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.31□□□□□ -1.88
MSI1O43347 DUSP12P1-201ENST00000612874 516 ntBASIC3.31□□□□□ -1.88
MSI1O43347 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
MSI1O43347 MTND1P37-201ENST00000636562 264 ntBASIC3.31□□□□□ -1.88
MSI1O43347 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MSI1O43347 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.31□□□□□ -1.88
MSI1O43347 AC008568.2-201ENST00000623862 2313 ntBASIC3.31□□□□□ -1.88
MSI1O43347 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MSI1O43347 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
MSI1O43347 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.3□□□□□ -1.88
MSI1O43347 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MSI1O43347 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MSI1O43347 SNORA4.3-201ENST00000365564 137 ntBASIC3.3□□□□□ -1.88
MSI1O43347 RNU2-33P-201ENST00000410344 192 ntBASIC3.3□□□□□ -1.88
MSI1O43347 RNU4-47P-201ENST00000410876 114 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.3□□□□□ -1.88
MSI1O43347 UBE2D3P2-201ENST00000424409 445 ntBASIC3.3□□□□□ -1.88
MSI1O43347 MTCO3P46-201ENST00000425787 232 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 AL591704.1-201ENST00000432574 275 ntBASIC3.3□□□□□ -1.88
MSI1O43347 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 PRPS1P1-201ENST00000445305 876 ntBASIC3.3□□□□□ -1.88
MSI1O43347 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 RNU7-66P-201ENST00000459469 62 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 Y_RNA.654-201ENST00000497848 106 ntBASIC3.3□□□□□ -1.88
MSI1O43347 FAM206BP-201ENST00000510179 541 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.3□□□□□ -1.88
MSI1O43347 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.3□□□□□ -1.88
MSI1O43347 RAB11AP2-201ENST00000545905 639 ntBASIC3.3□□□□□ -1.88
MSI1O43347 SCOCP1-201ENST00000554676 349 ntBASIC3.3□□□□□ -1.88
MSI1O43347 PSMA3P-201ENST00000555485 635 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 FGF7P1-201ENST00000582820 288 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC091135.1-201ENST00000585943 307 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 AC005261.5-201ENST00000596280 355 ntBASIC3.3□□□□□ -1.88
MSI1O43347 AC007687.1-201ENST00000602704 304 ntBASIC3.3□□□□□ -1.88
MSI1O43347 CTHRC1P1-201ENST00000605383 469 ntBASIC3.3□□□□□ -1.88
MSI1O43347 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.3□□□□□ -1.88
MSI1O43347 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.3□□□□□ -1.88
MSI1O43347 Z99571.1-201ENST00000636677 394 ntBASIC3.3□□□□□ -1.88
MSI1O43347 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MSI1O43347 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
MSI1O43347 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MSI1O43347 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
MSI1O43347 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MSI1O43347 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MSI1O43347 RNU6-50P-201ENST00000362356 103 ntBASIC3.29□□□□□ -1.88
MSI1O43347 SNORD81.2-201ENST00000365153 76 ntBASIC3.29□□□□□ -1.88
MSI1O43347 Y_RNA.373-201ENST00000365600 103 ntBASIC3.29□□□□□ -1.88
MSI1O43347 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MSI1O43347 SNORA32.2-201ENST00000384049 122 ntBASIC3.29□□□□□ -1.88
MSI1O43347 SNORD70.1-201ENST00000391007 85 ntBASIC3.29□□□□□ -1.88
MSI1O43347 HSPE1P26-201ENST00000405341 275 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC009161.1-201ENST00000417306 376 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.29□□□□□ -1.88
MSI1O43347 ZNF863P-201ENST00000426746 417 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC007919.1-201ENST00000429380 217 ntBASIC3.29□□□□□ -1.88
MSI1O43347 RPL23AP69-201ENST00000431134 458 ntBASIC3.29□□□□□ -1.88
MSI1O43347 RPL7P12-201ENST00000446719 750 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.29□□□□□ -1.88
MSI1O43347 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC007547.1-201ENST00000462177 490 ntBASIC3.29□□□□□ -1.88
MSI1O43347 RPL21P104-201ENST00000464143 478 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC083904.1-201ENST00000487828 231 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms