Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC105129.3-201ENST00000605455 485 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AC004223.4-201ENST00000612426 332 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AC011939.3-201ENST00000613686 466 ntBASIC2.31□□□□□ -2.04
MSH4O15457 AC131159.1-201ENST00000621854 213 ntBASIC2.31□□□□□ -2.04
MSH4O15457 YWHAEP7-203ENST00000622054 312 ntBASIC2.31□□□□□ -2.04
MSH4O15457 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
MSH4O15457 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
MSH4O15457 AC092881.1-201ENST00000638218 2733 ntBASIC2.3□□□□□ -2.04
MSH4O15457 SNORD114-1-201ENST00000362705 72 ntBASIC2.3□□□□□ -2.04
MSH4O15457 RNU5F-7P-201ENST00000363696 115 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC027124.2-201ENST00000428249 105 ntBASIC2.3□□□□□ -2.04
MSH4O15457 SUMO1P4-201ENST00000429430 302 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.3□□□□□ -2.04
MSH4O15457 HMGB3P12-201ENST00000438745 556 ntBASIC2.3□□□□□ -2.04
MSH4O15457 USP9YP8-201ENST00000441913 500 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AL590365.1-201ENST00000450788 243 ntBASIC2.3□□□□□ -2.04
MSH4O15457 MTATP6P7-201ENST00000453315 681 ntBASIC2.3□□□□□ -2.04
MSH4O15457 ZNF114P1-201ENST00000453500 292 ntBASIC2.3□□□□□ -2.04
MSH4O15457 RNU6-953P-201ENST00000459154 107 ntBASIC2.3□□□□□ -2.04
MSH4O15457 TRBV1-201ENST00000476502 284 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.3□□□□□ -2.04
MSH4O15457 MTND1P3-201ENST00000484956 952 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC109486.1-201ENST00000486833 374 ntBASIC2.3□□□□□ -2.04
MSH4O15457 RPL39P36-201ENST00000490784 156 ntBASIC2.3□□□□□ -2.04
MSH4O15457 RNU6-143P-201ENST00000516942 93 ntBASIC2.3□□□□□ -2.04
MSH4O15457 RNU6-703P-201ENST00000516946 107 ntBASIC2.3□□□□□ -2.04
MSH4O15457 SNORA31.18-201ENST00000517043 134 ntBASIC2.3□□□□□ -2.04
MSH4O15457 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
MSH4O15457 ZNF321P-202ENST00000550843 495 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC021739.1-201ENST00000559631 174 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.3□□□□□ -2.04
MSH4O15457 MIR3118-1-201ENST00000581787 76 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.3□□□□□ -2.04
MSH4O15457 AC073544.2-201ENST00000601155 540 ntBASIC2.3□□□□□ -2.04
MSH4O15457 BNIP3P9-201ENST00000603714 553 ntBASIC2.3□□□□□ -2.04
MSH4O15457 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC135507.1-201ENST00000607214 561 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC103710.2-201ENST00000609912 942 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AL589743.7-201ENST00000612637 233 ntBASIC2.3□□□□□ -2.04
MSH4O15457 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.3□□□□□ -2.04
MSH4O15457 MIR7844-201ENST00000616161 122 ntBASIC2.3□□□□□ -2.04
MSH4O15457 AC104010.1-201ENST00000616889 150 ntBASIC2.3□□□□□ -2.04
MSH4O15457 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.29□□□□□ -2.04
MSH4O15457 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.29□□□□□ -2.04
MSH4O15457 NACAP2-201ENST00000318548 624 ntBASIC2.29□□□□□ -2.04
MSH4O15457 SMIM11P1-201ENST00000369586 178 ntBASIC2.29□□□□□ -2.04
MSH4O15457 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
MSH4O15457 SNORD115.1-201ENST00000391109 76 ntBASIC2.29□□□□□ -2.04
MSH4O15457 RPS12P24-201ENST00000412619 387 ntBASIC2.29□□□□□ -2.04
MSH4O15457 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.29□□□□□ -2.04
MSH4O15457 HMGN2P10-201ENST00000448085 265 ntBASIC2.29□□□□□ -2.04
MSH4O15457 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH4O15457 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH4O15457 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.29□□□□□ -2.04
MSH4O15457 AC026801.1-201ENST00000497178 464 ntBASIC2.29□□□□□ -2.04
MSH4O15457 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.29□□□□□ -2.04
MSH4O15457 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH4O15457 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
MSH4O15457 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
MSH4O15457 AC006199.1-201ENST00000548728 219 ntBASIC2.29□□□□□ -2.04
MSH4O15457 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
MSH4O15457 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.29□□□□□ -2.04
MSH4O15457 MIR5697-201ENST00000578045 78 ntBASIC2.29□□□□□ -2.04
MSH4O15457 AC005261.5-201ENST00000596280 355 ntBASIC2.29□□□□□ -2.04
MSH4O15457 AC034229.4-201ENST00000607861 441 ntBASIC2.29□□□□□ -2.04
MSH4O15457 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.29□□□□□ -2.04
MSH4O15457 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
MSH4O15457 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MSH4O15457 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
MSH4O15457 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.28□□□□□ -2.04
MSH4O15457 RNU5E-6P-201ENST00000365574 115 ntBASIC2.28□□□□□ -2.04
MSH4O15457 RNU6-1083P-201ENST00000384022 107 ntBASIC2.28□□□□□ -2.04
MSH4O15457 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
MSH4O15457 GSTA9P-201ENST00000406231 611 ntBASIC2.28□□□□□ -2.04
MSH4O15457 FCF1P10-201ENST00000407590 479 ntBASIC2.28□□□□□ -2.04
MSH4O15457 RNU6-1328P-201ENST00000410938 106 ntBASIC2.28□□□□□ -2.04
MSH4O15457 SEPT2P1-201ENST00000419651 180 ntBASIC2.28□□□□□ -2.04
MSH4O15457 MTCO3P30-201ENST00000426425 670 ntBASIC2.28□□□□□ -2.04
MSH4O15457 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.28□□□□□ -2.04
MSH4O15457 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH4O15457 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH4O15457 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.28□□□□□ -2.04
MSH4O15457 MTND1P12-201ENST00000455231 147 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AL121769.1-201ENST00000469473 401 ntBASIC2.28□□□□□ -2.04
MSH4O15457 UBL5P3-201ENST00000475112 231 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH4O15457 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
MSH4O15457 RNU2-10P-201ENST00000516375 211 ntBASIC2.28□□□□□ -2.04
MSH4O15457 RNU6-1092P-201ENST00000516955 87 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.28□□□□□ -2.04
MSH4O15457 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH4O15457 AC011979.2-201ENST00000527568 352 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MSH4O15457 OR4R1P-201ENST00000529879 463 ntBASIC2.28□□□□□ -2.04
MSH4O15457 MIR3167-201ENST00000579623 85 ntBASIC2.28□□□□□ -2.04
MSH4O15457 MIR5089-201ENST00000580047 84 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AL391813.1-201ENST00000603098 260 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AL353778.1-201ENST00000603149 408 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AL356280.1-201ENST00000603614 379 ntBASIC2.28□□□□□ -2.04
MSH4O15457 AL355816.2-201ENST00000610049 647 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms