Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.43□□□□□ -1.86
NPHP1O15259 AC007536.1-201ENST00000533382 349 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 ADI1P3-201ENST00000549509 470 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 MIR4782-201ENST00000577987 79 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC245014.2-201ENST00000603689 287 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AL022154.1-201ENST00000604698 785 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC246785.4-201ENST00000605374 287 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AL158032.1-201ENST00000605401 106 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 MIR98-201ENST00000606724 119 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHP1O15259 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 MIR7515-201ENST00000637837 67 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPHP1O15259 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NPHP1O15259 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NPHP1O15259 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPHP1O15259 AC092593.1-201ENST00000515413 1815 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPHP1O15259 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
NPHP1O15259 Y_RNA.33-201ENST00000362591 102 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 Y_RNA.77-201ENST00000362962 107 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 U8.2-201ENST00000363156 134 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 SNORA75B-201ENST00000384053 137 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 BMS1P22-201ENST00000414726 313 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 RPL21P2-201ENST00000440049 481 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHP1O15259 RPL23AP70-201ENST00000483361 460 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHP1O15259 MTCO3P28-201ENST00000513351 515 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHP1O15259 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.42□□□□□ -1.86
NPHP1O15259 AL356057.1-201ENST00000533798 831 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 AL121821.2-201ENST00000556081 394 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 AC090616.3-201ENST00000582184 217 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 AC138649.3-201ENST00000622154 254 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 AC064859.1-201ENST00000624741 174 ntBASIC3.42□□□□□ -1.86
NPHP1O15259 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPHP1O15259 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPHP1O15259 CDC27P3-201ENST00000635418 1910 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP1O15259 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP1O15259 RNU6-395P-201ENST00000365662 106 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 USP9YP6-201ENST00000413550 854 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 BX295541.1-201ENST00000417774 250 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP1O15259 AL161651.1-201ENST00000440882 223 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHP1O15259 KATNBL1P3-201ENST00000443475 909 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC003071.1-201ENST00000451219 789 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP1O15259 AC116562.3-201ENST00000506136 177 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHP1O15259 RNU6-410P-201ENST00000517006 107 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NPHP1O15259 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.41□□□□□ -1.86
NPHP1O15259 AC068587.5-201ENST00000528506 175 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.41□□□□□ -1.86
NPHP1O15259 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP1O15259 MIR3913-1-201ENST00000577744 102 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NPHP1O15259 AC103810.1-201ENST00000579873 453 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 SNORD53-201ENST00000579969 78 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP1O15259 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP1O15259 AC010620.1-201ENST00000601088 1102 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC012119.1-201ENST00000603184 222 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC091152.3-201ENST00000604227 325 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC126118.1-201ENST00000607744 628 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP1O15259 MIR6134-201ENST00000617606 109 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC024940.5-201ENST00000622889 474 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AC093648.1-201ENST00000623546 606 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 AL157786.1-207ENST00000627771 695 ntBASIC3.41□□□□□ -1.86
NPHP1O15259 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP1O15259 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP1O15259 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.4□□□□□ -1.86
NPHP1O15259 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NPHP1O15259 RNU1-35P-201ENST00000362782 153 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 RNU6-461P-201ENST00000364195 107 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 RNU6-1180P-201ENST00000364935 107 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPHP1O15259 RNU6-166P-201ENST00000384371 107 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 RNU6-348P-201ENST00000384386 107 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NPHP1O15259 CISD1P1-201ENST00000393907 327 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AL160275.3-201ENST00000423876 471 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AC007560.1-201ENST00000426912 237 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 GPR143P-201ENST00000434155 205 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AL078601.1-201ENST00000444542 271 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AC233279.1-201ENST00000455300 423 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 RNU6-956P-201ENST00000458868 103 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.4□□□□□ -1.87
NPHP1O15259 ARL2BPP4-201ENST00000506854 471 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 RBBP4P6-201ENST00000508098 202 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms