Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 NANOGNBP1-201ENST00000448444 480 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AL118520.1-201ENST00000450770 291 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AC006512.1-201ENST00000468816 291 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 HMGB1P30-201ENST00000492455 606 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.93□□□□□ -1.94
AP3D1O14617 AC092436.1-201ENST00000506450 503 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AC105417.1-201ENST00000514691 285 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.93□□□□□ -1.94
AP3D1O14617 AP003392.2-201ENST00000527269 208 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AC025678.1-201ENST00000567861 338 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 MIR1254-2-201ENST00000579553 63 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 MIR4429-201ENST00000580105 73 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
AP3D1O14617 AC073539.2-201ENST00000597113 165 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.93□□□□□ -1.94
AP3D1O14617 AP001596.2-201ENST00000608410 312 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 AC104073.3-201ENST00000610942 955 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 RMST_4.1-201ENST00000616886 107 ntBASIC2.93□□□□□ -1.94
AP3D1O14617 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
AP3D1O14617 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
AP3D1O14617 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.92□□□□□ -1.94
AP3D1O14617 Y_RNA.1-201ENST00000352915 104 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 RNU6-259P-201ENST00000383999 107 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 MIR670-201ENST00000390142 98 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 MIR147B-201ENST00000390185 80 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
AP3D1O14617 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
AP3D1O14617 U3.37-201ENST00000408528 213 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 RNU2-25P-201ENST00000411041 191 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.92□□□□□ -1.94
AP3D1O14617 BX682237.1-201ENST00000415016 335 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC016907.1-201ENST00000419483 435 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC093151.1-201ENST00000427711 313 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 RPL23AP20-201ENST00000447965 421 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 UQCRHP3-201ENST00000451503 251 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC011005.2-201ENST00000487324 359 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.92□□□□□ -1.94
AP3D1O14617 AC110794.1-201ENST00000505816 425 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC104136.1-201ENST00000512969 394 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 RNU1-86P-201ENST00000516108 154 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 RNU1-107P-201ENST00000516617 154 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 RN7SKP40-201ENST00000517211 242 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 BTF3P12-201ENST00000519620 469 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.92□□□□□ -1.94
AP3D1O14617 AP005435.4-201ENST00000529514 284 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.92□□□□□ -1.94
AP3D1O14617 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.92□□□□□ -1.94
AP3D1O14617 NRBF2P5-201ENST00000603087 788 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AP000787.2-201ENST00000604432 568 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC008536.2-201ENST00000607284 349 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 AC007684.1-201ENST00000609671 477 ntBASIC2.92□□□□□ -1.94
AP3D1O14617 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.92□□□□□ -1.94
AP3D1O14617 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.92□□□□□ -1.94
AP3D1O14617 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.92□□□□□ -1.94
AP3D1O14617 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.92□□□□□ -1.94
AP3D1O14617 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
AP3D1O14617 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
AP3D1O14617 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.91□□□□□ -1.94
AP3D1O14617 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
AP3D1O14617 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 RNU6-72P-201ENST00000384285 79 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 RNU4-55P-201ENST00000410731 137 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 RN7SKP58-201ENST00000411010 305 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 MTCO3P30-201ENST00000426425 670 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AL669831.1-202ENST00000428504 417 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.91□□□□□ -1.94
AP3D1O14617 GTF2IP13-201ENST00000438487 386 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 DNAJC19P4-201ENST00000440115 345 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 Z75741.1-201ENST00000446793 314 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 VN1R34P-201ENST00000447387 883 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
AP3D1O14617 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.91□□□□□ -1.94
AP3D1O14617 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.91□□□□□ -1.94
AP3D1O14617 AC091153.1-201ENST00000466297 402 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AL121769.1-201ENST00000469473 401 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.91□□□□□ -1.94
AP3D1O14617 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
AP3D1O14617 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.91□□□□□ -1.94
AP3D1O14617 MIR892C-201ENST00000516410 77 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 RN7SKP219-201ENST00000516825 296 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.91□□□□□ -1.94
AP3D1O14617 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.91□□□□□ -1.94
AP3D1O14617 AGGF1P4-201ENST00000568249 801 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AC106782.4-201ENST00000568264 210 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 MIR3616-201ENST00000584070 92 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AC078795.2-201ENST00000602835 1252 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AC008121.1-201ENST00000603244 268 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 AC103591.3-201ENST00000608684 209 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 MIR7975-201ENST00000619350 68 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.91□□□□□ -1.94
AP3D1O14617 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
AP3D1O14617 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.91□□□□□ -1.94
AP3D1O14617 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms