Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC107214.2-201ENST00000608204 634 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC097478.2-201ENST00000610572 514 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC090970.3-201ENST00000612566 866 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
UPK1AO00322 AL109620.1-201ENST00000618738 1197 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC012150.2-201ENST00000621300 544 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1AO00322 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1AO00322 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UPK1AO00322 FAM133CP-201ENST00000332869 704 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 RNU4-92P-201ENST00000363783 136 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 RNU5A-8P-201ENST00000364102 114 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 SNORA16B-201ENST00000364674 135 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 RNU6-234P-201ENST00000365229 104 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK1AO00322 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UPK1AO00322 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1AO00322 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1AO00322 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1AO00322 AC093106.2-201ENST00000428212 385 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1AO00322 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.68□□□□□ -2.14
UPK1AO00322 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1AO00322 RPL7P12-201ENST00000446719 750 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK1AO00322 RPL36AP48-201ENST00000485521 314 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.68□□□□□ -2.14
UPK1AO00322 MTND4P2-201ENST00000507767 1203 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC008526.1-201ENST00000509149 338 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AF213884.2-201ENST00000510417 903 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
UPK1AO00322 SMURF2P1-201ENST00000514992 481 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 RNU7-193P-201ENST00000516723 65 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1AO00322 AC013828.2-201ENST00000532487 235 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC068587.4-201ENST00000533893 186 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK1AO00322 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 MIR4293-201ENST00000584305 78 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 VN1R82P-201ENST00000601481 356 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC025165.5-201ENST00000602802 578 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AL158042.1-201ENST00000605338 460 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC068276.1-201ENST00000605793 379 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC080013.3-201ENST00000606839 578 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK1AO00322 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UPK1AO00322 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
UPK1AO00322 Z75746.1-201ENST00000440243 2080 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 HSPA8P4-201ENST00000511877 1920 ntBASIC1.68□□□□□ -2.14
UPK1AO00322 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK1AO00322 RNU6-1280P-201ENST00000365211 107 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 RNU6-701P-201ENST00000384059 107 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 RNU6-636P-201ENST00000384598 107 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 RNU6-748P-201ENST00000384648 107 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 MIR1294-201ENST00000408503 142 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.67□□□□□ -2.14
UPK1AO00322 RPS24P7-201ENST00000416921 246 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK1AO00322 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.67□□□□□ -2.14
UPK1AO00322 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK1AO00322 AC004383.1-201ENST00000438135 289 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 NEFMP1-201ENST00000443423 1006 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 SNORA25.11-201ENST00000515935 105 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 SNORA31.3-201ENST00000516029 96 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 RNU6-1183P-201ENST00000517054 60 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK1AO00322 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UPK1AO00322 MIR3126-201ENST00000577443 74 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK1AO00322 MIR4509-3-201ENST00000578671 94 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 MIR3945-201ENST00000581853 98 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 MIR544B-201ENST00000582372 78 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 MIR4509-2-201ENST00000583920 94 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 BNIP3P9-201ENST00000603714 553 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AL138963.2-201ENST00000605137 226 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 MIR4509-1-201ENST00000618224 94 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 U4atac.1-201ENST00000618345 95 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 SDR42E1P4-201ENST00000620894 481 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AC091965.5-201ENST00000624785 342 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 AC099654.9-201ENST00000637055 678 ntBASIC1.67□□□□□ -2.14
UPK1AO00322 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
UPK1AO00322 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK1AO00322 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK1AO00322 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
UPK1AO00322 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UPK1AO00322 RNA5SP240-201ENST00000365355 128 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
UPK1AO00322 SNORA40.18-201ENST00000391200 128 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK1AO00322 AC097463.2-201ENST00000421074 142 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK1AO00322 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK1AO00322 AL445669.1-201ENST00000426743 755 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AL592045.1-201ENST00000429867 352 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 RPS15AP9-201ENST00000439856 381 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK1AO00322 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK1AO00322 MTATP6P14-201ENST00000455189 673 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms