Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL353729.1-201ENST00000425044 720 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RPL23AP30-201ENST00000432419 501 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AL445687.1-201ENST00000439946 251 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 IPO7P1-201ENST00000442031 636 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM1O00151 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AC128713.1-201ENST00000471495 306 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AC007182.2-201ENST00000489251 402 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RNA5SP356-201ENST00000515972 94 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 Vault.3-201ENST00000516676 95 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AC025755.1-201ENST00000521306 278 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PDLIM1O00151 RPS3AP23-202ENST00000574601 686 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AL355598.1-201ENST00000604169 202 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AL158032.1-201ENST00000605401 106 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AC022079.1-201ENST00000621546 602 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 CU459211.1-201ENST00000635667 749 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 MIR3199-2-201ENST00000636243 86 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 U2.21-201ENST00000637295 81 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 U6.99-201ENST00000637524 83 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 RNU6-641P-201ENST00000384006 107 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 MIR301A-201ENST00000385261 86 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 RN7SKP142-201ENST00000411236 328 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AC092809.3-201ENST00000415453 231 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 USP9YP20-201ENST00000419224 558 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 HMGB1P9-201ENST00000429856 646 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC098826.1-201ENST00000433943 471 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 RPS24P1-201ENST00000438550 371 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC011816.1-201ENST00000441346 546 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AL136380.1-201ENST00000447970 162 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AC004924.1-201ENST00000480160 781 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC022616.3-201ENST00000523940 148 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC087883.1-201ENST00000551882 391 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.41□□□□□ -2.02
PDLIM1O00151 AL451064.1-201ENST00000607718 471 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 PISRT1-201ENST00000626175 531 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 MIR7515-201ENST00000637837 67 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AP000553.5-201ENST00000641933 54 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 ELF2P3-201ENST00000445099 1506 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 AC110491.1-201ENST00000562191 2010 ntBASIC2.41□□□□□ -2.02
PDLIM1O00151 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM1O00151 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
PDLIM1O00151 ADAM3A-203ENST00000461344 2157 ntBASIC2.4□□□□□ -2.02
PDLIM1O00151 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
PDLIM1O00151 ELL2P3-201ENST00000457883 1602 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PDLIM1O00151 NACAP2-201ENST00000318548 624 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 RNU4-52P-201ENST00000384209 138 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 Y_RNA.510-201ENST00000384511 114 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 MIR23A-201ENST00000385245 73 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PDLIM1O00151 RNU2-39P-201ENST00000410604 198 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC114491.1-201ENST00000416095 246 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC073614.1-201ENST00000438690 650 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.4□□□□□ -2.03
PDLIM1O00151 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM1O00151 GAPDHP17-201ENST00000449858 1001 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.4□□□□□ -2.03
PDLIM1O00151 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 SNORD42A-201ENST00000459584 64 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 RAP1BP2-201ENST00000478270 544 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.4□□□□□ -2.03
PDLIM1O00151 RNU6-914P-201ENST00000516749 109 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 323 ms