Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL136313.1-201ENST00000624804 202 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 Y_RNA.490-201ENST00000384413 102 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AL138880.1-201ENST00000405824 642 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.38□□□□□ -2.35
COL6A5A8TX70 TMEM167AP1-201ENST00000423409 219 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 HSPE1P21-201ENST00000438283 308 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.38□□□□□ -2.35
COL6A5A8TX70 RNU7-193P-201ENST00000516723 65 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC012676.2-201ENST00000619258 186 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 MIR4320-201ENST00000636981 65 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.38□□□□□ -2.35
COL6A5A8TX70 SNORD114-31-201ENST00000363219 75 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 RNY3P14-201ENST00000384309 102 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 MIR938-201ENST00000401216 83 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 RNU6-362P-201ENST00000516736 90 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC090116.1-201ENST00000615679 446 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 SNORA25.8-201ENST00000364831 128 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 RPL21P32-201ENST00000419877 477 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 AL606490.4-201ENST00000423117 127 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 UBL5P1-201ENST00000507979 193 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC015849.6-201ENST00000605454 474 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 AL138726.1-201ENST00000614873 333 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
COL6A5A8TX70 AC023934.1-201ENST00000574529 2389 ntBASIC0.37□□□□□ -2.35
COL6A5A8TX70 Y_RNA.86-201ENST00000363020 111 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 MIR32-201ENST00000384965 70 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 MRPL35P1-201ENST00000404272 572 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 PDCL2P1-201ENST00000419302 352 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 RPL23AP6-201ENST00000446637 472 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 RPS27P22-201ENST00000478056 241 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 AC141557.1-201ENST00000540982 400 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AC090666.1-201ENST00000578241 445 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AP003072.4-201ENST00000624580 310 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AL049641.1-201ENST00000441055 1948 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 HSBP1P2-201ENST00000299671 229 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 RNU6-1187P-201ENST00000364771 110 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 Y_RNA.475-201ENST00000384345 101 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 RPS26P42-201ENST00000413485 326 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 AL513343.1-201ENST00000451818 792 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 TRGVB-201ENST00000453257 471 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 VN1R81P-201ENST00000602085 372 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 FRG1HP-204ENST00000617940 757 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
COL6A5A8TX70 SDAD1P2-201ENST00000441308 2028 ntBASIC0.36□□□□□ -2.35
COL6A5A8TX70 SNORA1.3-201ENST00000384676 136 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 MIR767-201ENST00000390228 109 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 RPS3AP36-201ENST00000398190 775 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 RSU1P2-202ENST00000437884 485 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 IGKV1-22-201ENST00000524313 326 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 AC016925.2-201ENST00000605108 242 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 FAM157B-203ENST00000639350 358 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 MIR92A1-201ENST00000385233 78 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 RNU2-64P-201ENST00000411315 191 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 DYNLT3P2-201ENST00000442517 295 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 AL773524.1-201ENST00000614065 229 ntBASIC0.35□□□□□ -2.35
COL6A5A8TX70 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.35□□□□□ -2.35
COL6A5A8TX70 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
COL6A5A8TX70 SNORD3E-201ENST00000362899 217 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 Y_RNA.117-201ENST00000363294 101 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
COL6A5A8TX70 TPTE2P6-202ENST00000445572 1007 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 AC109927.2-201ENST00000506416 303 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.34□□□□□ -2.35
COL6A5A8TX70 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.34□□□□□ -2.35
COL6A5A8TX70 AC026371.1-201ENST00000551867 419 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 CENPUP2-201ENST00000555897 1186 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 AC040174.2-201ENST00000602701 465 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 AC106800.4-201ENST00000614905 153 ntBASIC0.34□□□□□ -2.35
COL6A5A8TX70 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms