Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FAM27B-201ENST00000610601 213 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AL353743.1-202ENST00000431724 1695 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC010733.2-201ENST00000589496 5702 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RPL23P2-201ENST00000320371 421 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RNU1-15P-201ENST00000353977 144 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.83-201ENST00000363005 113 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 SNORD74.4-201ENST00000364129 80 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 MIR153-2-201ENST00000385225 87 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 MIR765-201ENST00000390226 114 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RNU1-139P-201ENST00000391307 165 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.602-201ENST00000410535 92 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC069285.2-201ENST00000440210 275 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AL353748.1-201ENST00000440753 474 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AL353705.4-201ENST00000449661 238 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RN7SL329P-201ENST00000467740 299 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RPL30P5-201ENST00000494923 336 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 SNRPCP2-201ENST00000504370 475 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC006499.6-201ENST00000511169 607 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC090281.1-201ENST00000523019 276 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 MRPS36P4-201ENST00000534436 298 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC016256.1-201ENST00000547971 354 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC023824.2-201ENST00000566185 400 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 CYP4A43P-201ENST00000568156 121 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC120057.2-201ENST00000571520 271 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AL160290.3-201ENST00000604869 165 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AL356157.2-201ENST00000605122 111 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC012603.1-201ENST00000606424 528 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC068870.2-201ENST00000620635 389 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC112200.1-201ENST00000625015 234 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 U2.22-201ENST00000636441 106 ntBASIC3.97□□□□□ -1.77
SHISA3A0PJX4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.97□□□□□ -1.77
SHISA3A0PJX4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SHISA3A0PJX4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.96□□□□□ -1.77
SHISA3A0PJX4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.96□□□□□ -1.77
SHISA3A0PJX4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 U8.4-201ENST00000363626 134 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 Y_RNA.464-201ENST00000384282 110 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RNU6-378P-201ENST00000384324 107 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RNU6-937P-201ENST00000384325 106 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AL645927.1-201ENST00000396783 406 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AL033519.2-201ENST00000403958 392 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RN7SKP106-201ENST00000410832 272 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 Y_RNA.793-201ENST00000411222 111 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RPL26P27-201ENST00000414397 437 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 TMSB10P2-201ENST00000416049 131 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AC007389.2-201ENST00000434630 306 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 CYCSP32-201ENST00000440548 321 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AURKAPS2-201ENST00000454983 333 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RPL7AP6-201ENST00000477943 801 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 UBE2CP3-201ENST00000502715 450 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RN7SKP272-201ENST00000516988 232 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 AC127459.3-201ENST00000624328 466 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 BMS1P21-201ENST00000634565 365 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.96□□□□□ -1.78
SHISA3A0PJX4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SHISA3A0PJX4 ZNF826P-207ENST00000622273 1910 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 MAPK10-320ENST00000641462 6696 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.95□□□□□ -1.78
SHISA3A0PJX4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.95□□□□□ -1.78
SHISA3A0PJX4 RNU6-222P-201ENST00000362438 107 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 RNA5SP305-201ENST00000362665 119 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 Z98749.2-208ENST00000381646 500 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 RNU6-746P-201ENST00000384112 109 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 RNU6-217P-201ENST00000384164 104 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 MIR518D-201ENST00000385014 87 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.95□□□□□ -1.78
SHISA3A0PJX4 EIF1P2-201ENST00000428233 350 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms