Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 OR4G2P-202ENST00000641004 1759 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL139276.1-201ENST00000311910 1001 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 RNU1-75P-201ENST00000347264 129 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 RNU6-600P-201ENST00000362524 99 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 SNORA44-201ENST00000384584 132 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 MIR607-201ENST00000385241 96 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 RNU6-817P-201ENST00000391083 104 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL138885.1-201ENST00000405921 675 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL451054.2-201ENST00000420896 202 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 RPL35AP12-201ENST00000425362 338 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 SRIP2-201ENST00000428470 166 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL356867.1-201ENST00000429623 299 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 SETP5-201ENST00000437270 562 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 MTND1P11-201ENST00000456661 876 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 RPL23AP14-201ENST00000468281 468 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 RBBP4P6-201ENST00000508098 202 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL138976.2-201ENST00000563989 694 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AC006270.2-201ENST00000578523 652 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 MIR4524B-201ENST00000581569 115 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 AL390240.1-201ENST00000612950 384 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 MTND4P29-201ENST00000503122 1372 ntBASIC3.25□□□□□ -1.89
RAI2Q9Y5P3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC066616.2-201ENST00000559334 1481 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 MIR514A1-201ENST00000385133 98 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 MT-TD-201ENST00000387419 68 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 RNU6-550P-201ENST00000391057 101 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL513331.1-201ENST00000411908 397 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL590383.1-201ENST00000428602 75 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL591212.2-201ENST00000433923 257 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 TXNP1-201ENST00000441872 371 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL513124.1-201ENST00000450410 614 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC007547.1-201ENST00000462177 490 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 RPS20P22-201ENST00000473700 357 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC117522.3-201ENST00000507974 584 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 Y_RNA.676-201ENST00000516393 96 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 BTF3P12-201ENST00000519620 469 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 PSMA2P1-201ENST00000526365 646 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AL137161.1-201ENST00000532231 390 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AP004242.1-201ENST00000533701 349 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC004024.1-201ENST00000549244 247 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC078814.3-201ENST00000553036 491 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC005668.1-201ENST00000571142 476 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 FGF7P1-201ENST00000582820 288 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC091135.1-201ENST00000585943 307 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC008521.1-201ENST00000587471 187 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC091903.1-201ENST00000624322 454 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 AC103710.2-202ENST00000641454 2853 ntBASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RAI2Q9Y5P3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 RNU6-510P-201ENST00000391239 108 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AL592114.1-201ENST00000403842 483 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms