Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC073343.1-201ENST00000328239 651 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 MIR301A-201ENST00000385261 86 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 RNU2-49P-201ENST00000410666 184 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 BX295541.1-201ENST00000417774 250 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 RPL31P35-201ENST00000431058 377 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC073614.1-201ENST00000438690 650 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC108938.1-201ENST00000451204 136 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-956P-201ENST00000458868 103 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 UBE2DNL-203ENST00000474922 222 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC007182.2-201ENST00000489251 402 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 SNORA31.18-201ENST00000517043 134 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AP003122.3-201ENST00000526316 255 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC084851.1-201ENST00000529105 249 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 MIR3167-201ENST00000579623 85 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AC073544.2-201ENST00000601155 540 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 AL589743.7-201ENST00000612637 233 ntBASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.5□□□□□ -2.01
ATG4BQ9Y4P1 FARSBP1-201ENST00000435808 1778 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-859P-201ENST00000362728 107 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-461P-201ENST00000364195 107 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-658P-201ENST00000384606 106 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RNU2-52P-201ENST00000410680 190 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 USP9YP6-201ENST00000413550 854 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC114491.1-201ENST00000416095 246 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AL353729.1-201ENST00000425044 720 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RPL23AP30-201ENST00000432419 501 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 MICF-203ENST00000432679 129 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RPL36AP6-201ENST00000435770 321 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC009961.2-201ENST00000435771 251 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 MTCO2P16-201ENST00000436962 677 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC244505.5-201ENST00000443639 207 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 MTND2P22-201ENST00000444325 1033 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 USP9YP29-201ENST00000445112 563 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC003071.1-201ENST00000451219 789 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 OR5B19P-201ENST00000531766 928 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC021739.1-201ENST00000559631 174 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 OR1M4P-201ENST00000589199 287 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC119751.7-201ENST00000600494 245 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC064872.1-201ENST00000604823 1072 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AC090578.1-201ENST00000604955 591 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 MIR98-201ENST00000606724 119 ntBASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
ATG4BQ9Y4P1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 RNU1-109P-201ENST00000383960 147 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 Y_RNA.534-201ENST00000384599 112 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 RNU2-39P-201ENST00000410604 198 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-248P-201ENST00000410720 107 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AC011816.1-201ENST00000441346 546 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AL136380.1-201ENST00000447970 162 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms