Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-14P-201ENST00000384630 106 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 RN7SKP53-201ENST00000411337 315 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 RNA5SP111-201ENST00000411386 101 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC096664.2-201ENST00000411843 406 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC017079.2-201ENST00000416102 485 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC006989.1-201ENST00000427212 131 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AL591704.1-201ENST00000432574 275 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC006028.1-201ENST00000438379 402 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 HMGB1P18-201ENST00000438801 619 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC104058.1-201ENST00000448028 297 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 SCARNA18-201ENST00000459004 134 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC110794.1-201ENST00000505816 425 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-1038P-201ENST00000516516 104 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AL118558.2-201ENST00000556294 238 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AC005951.2-201ENST00000576282 495 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 MIR3690-201ENST00000580266 75 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 MIR5583-1-201ENST00000580941 59 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 YPEL5P2-201ENST00000605553 359 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 MAPK10-362ENST00000641864 4484 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 FRG1CP-201ENST00000358464 769 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.414-201ENST00000384011 101 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-1127P-201ENST00000384580 107 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 POLHP1-201ENST00000411806 470 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AL513331.1-201ENST00000411908 397 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 BX323014.1-201ENST00000412876 237 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC005300.1-201ENST00000428401 373 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 VN1R17P-201ENST00000472048 1090 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 IGKV2-26-201ENST00000518305 343 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 SNRPGP16-201ENST00000533275 226 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 OR11H5P-201ENST00000554039 926 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC026464.5-201ENST00000562497 722 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 DPPA3P3-201ENST00000603842 430 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC009570.1-201ENST00000609599 745 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC006023.2-201ENST00000609916 167 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC104237.2-201ENST00000612456 443 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 MIR8057-201ENST00000620957 69 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 MTND1P37-201ENST00000636562 264 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 AC010733.2-201ENST00000589496 5702 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 SRP72P2-201ENST00000344851 1979 ntBASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX2IPQ9Y2D8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-283P-201ENST00000364788 107 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.460-201ENST00000384255 102 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AC080125.1-201ENST00000414888 684 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AL591212.2-201ENST00000433923 257 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 PRPS1P1-201ENST00000445305 876 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 RPS15AP27-201ENST00000449183 343 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 RPL23AP31-201ENST00000456160 467 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 snoU13.4-201ENST00000458916 104 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AC083904.1-201ENST00000487828 231 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 MTND4LP22-201ENST00000508209 276 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.691-201ENST00000516611 103 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-1073P-201ENST00000517182 106 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 SCOCP1-201ENST00000554676 349 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 MIR3921-201ENST00000577308 85 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 MIR4298-201ENST00000584380 73 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AC044792.1-201ENST00000593294 196 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 AC006026.1-201ENST00000444025 1803 ntBASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms