Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC008498.1-201ENST00000613012 531 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC007494.3-201ENST00000624660 743 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 UBE2L2-201ENST00000254302 429 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-778P-201ENST00000363269 103 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 SMIM11P1-201ENST00000369586 178 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RPS15AP12-201ENST00000419498 388 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 MTND2P18-201ENST00000419962 1030 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 CYCSP46-201ENST00000423569 204 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 SKA2P1-201ENST00000425592 390 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AL358075.3-201ENST00000426289 226 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC104651.1-201ENST00000427559 735 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 PGBD4P3-201ENST00000440731 581 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 NEFMP1-201ENST00000443423 1006 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RPS15AP27-201ENST00000449183 343 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC098826.2-201ENST00000452011 651 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 SNRPFP4-201ENST00000456366 242 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RPL26P9-201ENST00000457466 433 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 MTCO2P29-201ENST00000465212 189 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC119751.5-201ENST00000514077 770 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RNU2-10P-201ENST00000516375 211 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-1092P-201ENST00000516955 87 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 RNA5SP337-201ENST00000517007 109 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC025755.1-201ENST00000521306 278 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AP002770.2-201ENST00000543613 532 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 MRPS36P5-201ENST00000551909 298 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 HMGN1P30-201ENST00000589286 268 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 AL121917.1-203ENST00000605534 577 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 DUSP12P1-201ENST00000612874 516 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 FRG1KP-201ENST00000623592 341 ntBASIC2.09□□□□□ -2.07
TRAPPC4Q9Y296 Z82209.1-201ENST00000422141 2135 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 HSPE1P11-201ENST00000339579 310 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-512P-201ENST00000364438 103 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 SNORA68.1-201ENST00000364537 132 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AL021407.1-201ENST00000404531 386 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC023141.4-201ENST00000412031 328 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 NDUFS5P4-201ENST00000412983 318 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 BPY2DP-201ENST00000422208 265 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 HMGB1P27-201ENST00000431429 603 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 GPM6BP2-201ENST00000432046 144 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 GPM6BP1-201ENST00000446387 144 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 RPS29P20-201ENST00000489592 171 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 RPS27AP10-201ENST00000496103 208 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 EIF4EP3-201ENST00000498782 656 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 HMGB3P3-201ENST00000510526 400 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 MRPS36P2-201ENST00000512569 299 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 RNA5SP165-201ENST00000517142 115 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC011979.2-201ENST00000527568 352 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 RPL21P5-201ENST00000554662 472 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 MIR548AB-201ENST00000584917 84 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC007938.3-201ENST00000604965 623 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 MTND4LP5-201ENST00000605152 292 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC091304.9-201ENST00000612091 226 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AL365204.3-201ENST00000612448 685 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
TRAPPC4Q9Y296 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 ELF2P3-201ENST00000445099 1506 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 OR56A5-201ENST00000340110 738 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-960P-201ENST00000364056 120 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 RNU1-73P-201ENST00000383971 164 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 MIR23A-201ENST00000385245 73 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 MT-TH-201ENST00000387441 69 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 Y_RNA.598-201ENST00000410480 95 ntBASIC2.07□□□□□ -2.08
TRAPPC4Q9Y296 RNU2-68P-201ENST00000410878 191 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms